Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-142
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-227
Cow position:
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 128

Conread position: 1-233
Cow position:
Alignm length: 233
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-247
Cow position:
Alignm length: 247
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-283
Cow position:
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 1-291
Cow position:
Alignm length: 291
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 0

Conread position: 1-295
Cow position:
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-299
Cow position:
Alignm length: 299
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-300
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 95, 14

Conread position: 1-306
Cow position:
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 16

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 1-313
Cow position:
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 22

Conread position: 1-313
Cow position:
Alignm length: 333
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 27

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-320
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 54

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 262

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 260

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 288

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 168

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 109

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 83

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 13

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 163

Conread position: 1-327
Cow position:
Alignm length: 328
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 43

Conread position: 1-333
Cow position:
Alignm length: 341
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 1-333
Cow position:
Alignm length: 338
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 177

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 75

Conread position: 1-334
Cow position:
Alignm length: 335
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 87

Conread position: 1-334
Cow position:
Alignm length: 336
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 49

Conread position: 1-335
Cow position:
Alignm length: 340
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 1-335
Cow position:
Alignm length: 339
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 82, 42

Conread position: 1-337
Cow position:
Alignm length: 338
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-342
Cow position:
Alignm length: 344
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 1-349
Cow position:
Alignm length: 350
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 169

Conread position: 1-352
Cow position:
Alignm length: 354
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 21

Conread position: 1-352
Cow position:
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 103

Conread position: 1-355
Cow position:
Alignm length: 356
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 67

Conread position: 1-358
Cow position:
Alignm length: 364
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-364
Cow position:
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 199

Conread position: 1-365
Cow position:
Alignm length: 372
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 49

Conread position: 1-365
Cow position:
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 327

Conread position: 1-370
Cow position:
Alignm length: 371
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 24

Conread position: 1-371
Cow position:
Alignm length: 371
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 0

Conread position: 1-371
Cow position:
Alignm length: 373
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 72

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 276
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 176, 59

Conread position: 1-406
Cow position:
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 46

Conread position: 1-413
Cow position:
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 27

Conread position: 1-413
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 46

Conread position: 1-414
Cow position:
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 25

Conread position: 1-425
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 59

Conread position: 1-509
Cow position:
Alignm length: 520
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 2-160
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 143, 0

Conread position: 2-235
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 2-239
Cow position:
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 206

Conread position: 2-248
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 45

Conread position: 2-298
Cow position:
Alignm length: 298
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 99

Conread position: 2-320
Cow position:
Alignm length: 320
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 0

Conread position: 2-326
Cow position:
Alignm length: 326
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 178

Conread position: 2-326
Cow position:
Alignm length: 330
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 2-329
Cow position:
Alignm length: 341
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 41

Conread position: 2-425
Cow position:
Alignm length: 436
Alignm identity: 286
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 116

Conread position: 3-180
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 3-184
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 142

Conread position: 3-307
Cow position:
Alignm length: 306
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 57

Conread position: 3-311
Cow position:
Alignm length: 311
Alignm identity: 198
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 22

Conread position: 3-325
Cow position:
Alignm length: 324
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 40

Conread position: 3-333
Cow position:
Alignm length: 334
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 41

Conread position: 4-193
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 4-245
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 4-266
Cow position:
Alignm length: 264
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 22

Conread position: 4-326
Cow position:
Alignm length: 324
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 0

Conread position: 4-333
Cow position:
Alignm length: 332
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 84

Conread position: 4-334
Cow position:
Alignm length: 332
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 47

Conread position: 4-370
Cow position:
Alignm length: 369
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 174

Conread position: 4-370
Cow position:
Alignm length: 370
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 24

Conread position: 4-499
Cow position:
Alignm length: 511
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 18

Conread position: 5-386
Cow position:
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 23

Conread position: 6-216
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 77

Conread position: 6-333
Cow position:
Alignm length: 334
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 44

Conread position: 6-373
Cow position:
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 332

Conread position: 7-426
Cow position:
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 61

Conread position: 8-205
Cow position:
Alignm length: 198
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 8-307
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 22

Conread position: 10-416
Cow position:
Alignm length: 411
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 186, 8

Conread position: 14-326
Cow position:
Alignm length: 314
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 131

Conread position: 16-342
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 107, 57

Conread position: 19-286
Cow position:
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 27-416
Cow position:
Alignm length: 400
Alignm identity: 273
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 282, 37

Conread position: 28-201
Cow position:
Alignm length: 176
Alignm identity: 140
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 84, 15

Conread position: 28-284
Cow position:
Alignm length: 265
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 36

Conread position: 30-366
Cow position:
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 194

Conread position: 30-413
Cow position:
Alignm length: 398
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 39

Conread position: 34-196
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 76

Conread position: 34-397
Cow position:
Alignm length: 372
Alignm identity: 242
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 111

Conread position: 35-252
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 40-314
Cow position:
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 40-335
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 46

Conread position: 40-425
Cow position:
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 106

Conread position: 41-314
Cow position:
Alignm length: 274
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 44-278
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 132

Conread position: 44-330
Cow position:
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 11

Conread position: 44-333
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 265, 35

Conread position: 65-413
Cow position:
Alignm length: 358
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 52

Conread position: 68-405
Cow position:
Alignm length: 348
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 45

Conread position: 69-305
Cow position:
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 69-416
Cow position:
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 65

Conread position: 70-325
Cow position:
Alignm length: 257
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 239, 14

Conread position: 84-406
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 92

Conread position: 85-401
Cow position:
Alignm length: 329
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 294

Conread position: 86-307
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 87-278
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 89

Conread position: 100-352
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 100-370
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 209, 23

Conread position: 125-336
Cow position:
Alignm length: 213
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 204

Conread position: 136-333
Cow position:
Alignm length: 199
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 25

Conread position: 146-326
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 163, 0

Conread position: 147-413
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 164, 24

Conread position: 160-343
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 151, 0

Conread position: 164-350
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 86

Conread position: 165-413
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 107, 80

Conread position: 175-444
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 85

Conread position: 182-327
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 195-425
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 114, 0

Conread position: 195-425
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 114, 0

Conread position: 208-326
Cow position:
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 210-333
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 210-509
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 62

Conread position: 215-326
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 215-343
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 231-326
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 232-326
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 331-509
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 169, 14

Conread position: 602-744
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 76

Conread position: 607-730
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 607-744
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 119, 54

Show alignments to all cow chromosomes.