Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031J08.3 |
| Conread position: | 1-160 |
| Cow position: | chr6:50497564-50497405 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 134 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-185 |
| Cow position: | chr6:42723032-42722849 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 1-242 |
| Cow position: | chr6:39162093-39162320 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 1-259 |
| Cow position: | chr6:57870109-57869851 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 1-265 |
| Cow position: | chr6:42927278-42927540 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-281 |
| Cow position: | chr6:21971568-21971860 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-306 |
| Cow position: | chr6:60170473-60170167 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 1-307 |
| Cow position: | chr6:5951342-5951046 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-307 |
| Cow position: | chr6:28274878-28275182 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-307 |
| Cow position: | chr6:33388728-33389041 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 72 |
| Conread position: | 1-307 |
| Cow position: | chr6:57009967-57009662 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 154, 43 |
| Conread position: | 1-314 |
| Cow position: | chr6:3278056-3277743 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-314 |
| Cow position: | chr6:8761406-8761098 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-314 |
| Cow position: | chr6:17045953-17046262 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 1-314 |
| Cow position: | chr6:65841489-65841791 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-325 |
| Cow position: | chr6:13276697-13277019 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 72 |
| Conread position: | 1-326 |
| Cow position: | chr6:2374598-2374920 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 43 |
| Conread position: | 1-326 |
| Cow position: | chr6:2554602-2554926 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 85 |
| Conread position: | 1-326 |
| Cow position: | chr6:8201626-8201957 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 105 |
| Conread position: | 1-326 |
| Cow position: | chr6:13103952-13104278 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 1-326 |
| Cow position: | chr6:13846942-13847252 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 45 |
| Conread position: | 1-326 |
| Cow position: | chr6:13943805-13944129 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 1-326 |
| Cow position: | chr6:20561215-20560892 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 73 |
| Conread position: | 1-326 |
| Cow position: | chr6:24238959-24239285 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr6:27169471-27169801 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 1-326 |
| Cow position: | chr6:27469146-27469467 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 1-326 |
| Cow position: | chr6:27530109-27529787 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 160 |
| Conread position: | 1-326 |
| Cow position: | chr6:28491619-28491294 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 127 |
| Conread position: | 1-326 |
| Cow position: | chr6:33459759-33460083 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 49 |
| Conread position: | 1-326 |
| Cow position: | chr6:34127243-34127573 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-326 |
| Cow position: | chr6:34893115-34892786 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 67 |
| Conread position: | 1-326 |
| Cow position: | chr6:35876824-35876498 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 0 |
| Conread position: | 1-326 |
| Cow position: | chr6:55544432-55544107 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 21 |
| Conread position: | 1-326 |
| Cow position: | chr6:58409018-58408692 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr6:65927831-65928156 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 143 |
| Conread position: | 1-326 |
| Cow position: | chr6:68026676-68027012 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-333 |
| Cow position: | chr6:17598385-17598051 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-333 |
| Cow position: | chr6:26670969-26670630 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 145 |
| Conread position: | 1-333 |
| Cow position: | chr6:28063232-28063564 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 175 |
| Conread position: | 1-333 |
| Cow position: | chr6:32074841-32074508 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 1-333 |
| Cow position: | chr6:44028942-44029267 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 72 |
| Conread position: | 1-333 |
| Cow position: | chr6:65822232-65821898 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-334 |
| Cow position: | chr6:19453817-19454143 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 1-334 |
| Cow position: | chr6:44150662-44150327 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 0 |
| Conread position: | 1-343 |
| Cow position: | chr6:7866857-7866514 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 0 |
| Conread position: | 1-364 |
| Cow position: | chr6:3889585-3889223 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 343 |
| Conread position: | 1-364 |
| Cow position: | chr6:15141281-15140925 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 50 |
| Conread position: | 1-364 |
| Cow position: | chr6:15280648-15280297 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 48 |
| Conread position: | 1-364 |
| Cow position: | chr6:30275284-30274924 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 297 |
| Conread position: | 1-364 |
| Cow position: | chr6:36525937-36526303 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 105 |
| Conread position: | 1-400 |
| Cow position: | chr6:32330897-32330496 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 271 |
| Conread position: | 1-411 |
| Cow position: | chr6:37642294-37642692 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 175 |
| Conread position: | 1-413 |
| Cow position: | chr6:16672280-16672693 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 285, 57 |
| Conread position: | 1-415 |
| Cow position: | chr6:28474596-28475025 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 172 |
| Conread position: | 1-422 |
| Cow position: | chr6:7179795-7179374 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 58 |
| Conread position: | 1-498 |
| Cow position: | chr6:37116033-37116534 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 1-509 |
| Cow position: | chr6:38232170-38232688 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 2-314 |
| Cow position: | chr6:12528729-12529035 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 2-317 |
| Cow position: | chr6:25214155-25214468 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 2-326 |
| Cow position: | chr6:331573-331249 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 173 |
| Conread position: | 2-326 |
| Cow position: | chr6:3488505-3488179 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 244 |
| Conread position: | 2-326 |
| Cow position: | chr6:43617612-43617935 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 74 |
| Conread position: | 2-332 |
| Cow position: | chr6:52116151-52116493 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 177, 23 |
| Conread position: | 2-355 |
| Cow position: | chr6:40554697-40554339 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 85 |
| Conread position: | 2-370 |
| Cow position: | chr6:6566508-6566864 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 41 |
| Conread position: | 2-413 |
| Cow position: | chr6:1100691-1100275 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 83 |
| Conread position: | 3-325 |
| Cow position: | chr6:65880763-65881086 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 0 |
| Conread position: | 3-326 |
| Cow position: | chr6:701851-702170 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 267 |
| Conread position: | 3-326 |
| Cow position: | chr6:7141575-7141267 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 3-337 |
| Cow position: | chr6:33900727-33900394 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 3-362 |
| Cow position: | chr6:41552919-41553260 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 3-362 |
| Cow position: | chr6:65900022-65899645 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 199 |
| Conread position: | 3-364 |
| Cow position: | chr6:29311387-29311746 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 325 |
| Conread position: | 3-413 |
| Cow position: | chr6:59741153-59740746 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 49 |
| Conread position: | 4-166 |
| Cow position: | chr6:10641022-10641185 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 4-177 |
| Cow position: | chr6:68362422-68362252 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-290 |
| Cow position: | chr6:11277793-11277513 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 4-307 |
| Cow position: | chr6:43793873-43793554 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 4-307 |
| Cow position: | chr6:66231700-66231995 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 4-314 |
| Cow position: | chr6:13317588-13317291 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 4-334 |
| Cow position: | chr6:30478988-30479327 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 4-353 |
| Cow position: | chr6:59919381-59919038 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 172 |
| Conread position: | 4-445 |
| Cow position: | chr6:66539709-66540129 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 5-242 |
| Cow position: | chr6:19338249-19338022 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 207, 13 |
| Conread position: | 6-335 |
| Cow position: | chr6:10630365-10630676 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 8-287 |
| Cow position: | chr6:913542-913822 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 8-326 |
| Cow position: | chr6:1405337-1405018 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 8-326 |
| Cow position: | chr6:1412039-1411720 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 8-370 |
| Cow position: | chr6:10558759-10558400 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 329 |
| Conread position: | 9-326 |
| Cow position: | chr6:16051782-16052100 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 0 |
| Conread position: | 10-314 |
| Cow position: | chr6:64715134-64715436 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 10-326 |
| Cow position: | chr6:3148908-3149224 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 40 |
| Conread position: | 14-247 |
| Cow position: | chr6:63198167-63197936 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 14-334 |
| Cow position: | chr6:34203414-34203732 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 220, 189 |
| Conread position: | 16-255 |
| Cow position: | chr6:17932023-17932262 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 19-326 |
| Cow position: | chr6:39908441-39908747 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 115 |
| Conread position: | 27-291 |
| Cow position: | chr6:31568879-31568621 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 27-314 |
| Cow position: | chr6:47043284-47042992 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 28-184 |
| Cow position: | chr6:40240342-40240498 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 133, 111 |
| Conread position: | 29-231 |
| Cow position: | chr6:49520459-49520256 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 29-307 |
| Cow position: | chr6:36229014-36228742 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 30-333 |
| Cow position: | chr6:11402958-11403270 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 31-454 |
| Cow position: | chr6:25359430-25359863 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 149, 236 |
| Conread position: | 34-188 |
| Cow position: | chr6:52804453-52804606 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 34-280 |
| Cow position: | chr6:44524829-44524595 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 34-289 |
| Cow position: | chr6:35722291-35722544 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 34-291 |
| Cow position: | chr6:34024737-34024988 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 34-307 |
| Cow position: | chr6:15896504-15896241 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 34-392 |
| Cow position: | chr6:15476204-15476569 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 146, 51 |
| Conread position: | 40-189 |
| Cow position: | chr6:52692988-52693137 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-335 |
| Cow position: | chr6:526171-526463 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 267, 207 |
| Conread position: | 40-335 |
| Cow position: | chr6:35433471-35433759 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 223, 33 |
| Conread position: | 40-392 |
| Cow position: | chr6:62397088-62397460 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 48-413 |
| Cow position: | chr6:35420654-35420298 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 102 |
| Conread position: | 48-432 |
| Cow position: | chr6:12095459-12095085 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 55-236 |
| Cow position: | chr6:12092946-12092763 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 65-357 |
| Cow position: | chr6:40315015-40315296 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 23 |
| Conread position: | 65-509 |
| Cow position: | chr6:6476524-6476087 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 81 |
| Conread position: | 67-201 |
| Cow position: | chr6:65910746-65910881 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 87-370 |
| Cow position: | chr6:28105873-28105586 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 135 |
| Conread position: | 97-332 |
| Cow position: | chr6:6155677-6155910 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 102-299 |
| Cow position: | chr6:17099708-17099508 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 107-326 |
| Cow position: | chr6:40251663-40251883 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 121-413 |
| Cow position: | chr6:1383851-1383568 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 229, 43 |
| Conread position: | 157-509 |
| Cow position: | chr6:43608308-43607954 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 151 |
| Conread position: | 166-327 |
| Cow position: | chr6:65007747-65007907 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 143, 44 |
| Conread position: | 182-459 |
| Cow position: | chr6:10641235-10641517 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 200-311 |
| Cow position: | chr6:9738793-9738905 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 203-364 |
| Cow position: | chr6:1822544-1822379 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 204-314 |
| Cow position: | chr6:58026855-58026964 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 207-314 |
| Cow position: | chr6:39437647-39437754 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-326 |
| Cow position: | chr6:10499624-10499504 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 209-370 |
| Cow position: | chr6:52693125-52693282 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 128 |
| Conread position: | 211-333 |
| Cow position: | chr6:12650845-12650721 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 228-326 |
| Cow position: | chr6:40275209-40275308 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 573-722 |
| Cow position: | chr6:10643627-10643770 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 591-722 |
| Cow position: | chr6:6476067-6475939 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 591-737 |
| Cow position: | chr6:42616548-42616690 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.