Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 1-233
Cow position:
Alignm length: 233
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-240
Cow position:
Alignm length: 241
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 27

Conread position: 1-270
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 13

Conread position: 1-274
Cow position:
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-278
Cow position:
Alignm length: 278
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 1-291
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 1-299
Cow position:
Alignm length: 301
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 102

Conread position: 1-301
Cow position:
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 0

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 1-313
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 107, 39

Conread position: 1-314
Cow position:
Alignm length: 315
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-320
Cow position:
Alignm length: 330
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 1-325
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 208, 24

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 188

Conread position: 1-326
Cow position:
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 58

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 71

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 33

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 72

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 329
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 85

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 318

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 175

Conread position: 1-326
Cow position:
Alignm length: 326
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 75

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-333
Cow position:
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 1-333
Cow position:
Alignm length: 347
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 145

Conread position: 1-334
Cow position:
Alignm length: 335
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 57

Conread position: 1-337
Cow position:
Alignm length: 338
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 48

Conread position: 1-349
Cow position:
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 23

Conread position: 1-349
Cow position:
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 260

Conread position: 1-364
Cow position:
Alignm length: 365
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 297

Conread position: 1-364
Cow position:
Alignm length: 365
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 326

Conread position: 1-364
Cow position:
Alignm length: 365
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 326

Conread position: 1-365
Cow position:
Alignm length: 366
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 327

Conread position: 1-370
Cow position:
Alignm length: 371
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 327

Conread position: 1-411
Cow position:
Alignm length: 415
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 175

Conread position: 1-425
Cow position:
Alignm length: 434
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 9

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-307
Cow position:
Alignm length: 308
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 206

Conread position: 2-326
Cow position:
Alignm length: 327
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 2-332
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 307, 24

Conread position: 2-347
Cow position:
Alignm length: 347
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 162

Conread position: 2-350
Cow position:
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 37

Conread position: 2-411
Cow position:
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 132

Conread position: 2-453
Cow position:
Alignm length: 461
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 2-509
Cow position:
Alignm length: 526
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 52

Conread position: 3-168
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 49

Conread position: 3-267
Cow position:
Alignm length: 265
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 3-282
Cow position:
Alignm length: 280
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 3-307
Cow position:
Alignm length: 305
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 3-307
Cow position:
Alignm length: 305
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-320
Cow position:
Alignm length: 319
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 21

Conread position: 3-336
Cow position:
Alignm length: 335
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 131

Conread position: 3-364
Cow position:
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 325

Conread position: 3-364
Cow position:
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 322

Conread position: 3-364
Cow position:
Alignm length: 364
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 325

Conread position: 3-509
Cow position:
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 3-509
Cow position:
Alignm length: 534
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 3-548
Cow position:
Alignm length: 559
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 46

Conread position: 4-291
Cow position:
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 34

Conread position: 4-307
Cow position:
Alignm length: 305
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 55

Conread position: 4-326
Cow position:
Alignm length: 324
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 102

Conread position: 4-334
Cow position:
Alignm length: 332
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 69

Conread position: 4-334
Cow position:
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 40

Conread position: 4-341
Cow position:
Alignm length: 344
Alignm identity: 227
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 288, 24

Conread position: 4-364
Cow position:
Alignm length: 364
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 163

Conread position: 4-370
Cow position:
Alignm length: 368
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 333

Conread position: 4-370
Cow position:
Alignm length: 368
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 333

Conread position: 4-396
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 4-507
Cow position:
Alignm length: 514
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 111

Conread position: 4-509
Cow position:
Alignm length: 508
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 40

Conread position: 4-509
Cow position:
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 36

Conread position: 5-317
Cow position:
Alignm length: 321
Alignm identity: 205
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 185, 12

Conread position: 6-278
Cow position:
Alignm length: 275
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 216, 104

Conread position: 6-314
Cow position:
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-327
Cow position:
Alignm length: 323
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 38

Conread position: 6-370
Cow position:
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 44

Conread position: 7-206
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 12-326
Cow position:
Alignm length: 316
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 69

Conread position: 15-370
Cow position:
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 27

Conread position: 16-333
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 93

Conread position: 29-290
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 57

Conread position: 34-291
Cow position:
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 31

Conread position: 34-403
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 224

Conread position: 34-413
Cow position:
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 243

Conread position: 34-429
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 241

Conread position: 40-207
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 145, 62

Conread position: 41-324
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 14

Conread position: 41-332
Cow position:
Alignm length: 295
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 185, 190

Conread position: 42-326
Cow position:
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 44-252
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 44-411
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 137, 64

Conread position: 47-307
Cow position:
Alignm length: 261
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 48-425
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 25

Conread position: 49-370
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 11

Conread position: 56-409
Cow position:
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 232

Conread position: 65-364
Cow position:
Alignm length: 301
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 263

Conread position: 77-413
Cow position:
Alignm length: 349
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 24

Conread position: 82-397
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 235, 52

Conread position: 125-352
Cow position:
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 126-325
Cow position:
Alignm length: 201
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 86

Conread position: 151-427
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 97

Conread position: 167-425
Cow position:
Alignm length: 265
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 171-327
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 175-370
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 75

Conread position: 183-327
Cow position:
Alignm length: 147
Alignm identity: 125
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 187-455
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 142, 102

Conread position: 190-326
Cow position:
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 0

Conread position: 195-511
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 189

Conread position: 197-306
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 221-307
Cow position:
Alignm length: 87
Alignm identity: 76
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 382-722
Cow position:
Alignm length: 346
Alignm identity: 218
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 208

Conread position: 595-744
Cow position:
Alignm length: 150
Alignm identity: 126
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 599-731
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 599-732
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 599-744
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 82

Conread position: 602-722
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 81

Conread position: 605-744
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 36

Show alignments to all cow chromosomes.