Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031J08.3 |
| Conread position: | 1-132 |
| Cow position: | chr9:8969102-8968968 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-155 |
| Cow position: | chr9:6830734-6830580 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-180 |
| Cow position: | chr9:4654839-4654664 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-181 |
| Cow position: | chr9:831610-831430 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-208 |
| Cow position: | chr9:2199930-2200137 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-214 |
| Cow position: | chr9:59425507-59425712 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 1-236 |
| Cow position: | chr9:46625975-46625741 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-252 |
| Cow position: | chr9:29028405-29028151 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 1-281 |
| Cow position: | chr9:28021372-28021654 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 1-292 |
| Cow position: | chr9:2001579-2001296 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 47 |
| Conread position: | 1-292 |
| Cow position: | chr9:7013864-7014165 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 1-296 |
| Cow position: | chr9:4984592-4984885 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-301 |
| Cow position: | chr9:37162984-37162683 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-314 |
| Cow position: | chr9:3542634-3542943 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-314 |
| Cow position: | chr9:6051226-6050912 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 1-314 |
| Cow position: | chr9:10321634-10321944 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 1-314 |
| Cow position: | chr9:27034530-27034836 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-314 |
| Cow position: | chr9:42309506-42309819 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-319 |
| Cow position: | chr9:52570483-52570791 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-320 |
| Cow position: | chr9:9012928-9013250 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-325 |
| Cow position: | chr9:9330903-9330580 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-325 |
| Cow position: | chr9:30826505-30826830 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:131373-131040 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:780982-780655 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:1076375-1076048 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:1996089-1995765 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:2170879-2171207 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 210 |
| Conread position: | 1-326 |
| Cow position: | chr9:3006422-3006096 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:4532318-4532640 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 46 |
| Conread position: | 1-326 |
| Cow position: | chr9:7062269-7061943 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:16175591-16175916 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 156 |
| Conread position: | 1-326 |
| Cow position: | chr9:17064574-17064234 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:25755400-25755074 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:27933918-27934238 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:28677799-28678122 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 72 |
| Conread position: | 1-326 |
| Cow position: | chr9:30672192-30672517 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 24 |
| Conread position: | 1-326 |
| Cow position: | chr9:34242774-34242448 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 191 |
| Conread position: | 1-326 |
| Cow position: | chr9:36724326-36724651 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 175 |
| Conread position: | 1-326 |
| Cow position: | chr9:45873172-45873498 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr9:50789501-50789826 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 164 |
| Conread position: | 1-326 |
| Cow position: | chr9:59174333-59174011 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 43 |
| Conread position: | 1-326 |
| Cow position: | chr9:59455775-59455449 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 9 |
| Conread position: | 1-326 |
| Cow position: | chr9:59482849-59482523 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 100 |
| Conread position: | 1-326 |
| Cow position: | chr9:59535921-59536244 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 46 |
| Conread position: | 1-327 |
| Cow position: | chr9:792690-792367 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 204 |
| Conread position: | 1-327 |
| Cow position: | chr9:3548349-3548023 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 200 |
| Conread position: | 1-332 |
| Cow position: | chr9:5424359-5424028 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 1-332 |
| Cow position: | chr9:35317754-35317421 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-333 |
| Cow position: | chr9:10315192-10315524 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 72 |
| Conread position: | 1-333 |
| Cow position: | chr9:31194343-31194009 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 1-333 |
| Cow position: | chr9:37063971-37063646 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 41 |
| Conread position: | 1-348 |
| Cow position: | chr9:2500471-2500124 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 336 |
| Conread position: | 1-350 |
| Cow position: | chr9:9055242-9054892 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 0 |
| Conread position: | 1-355 |
| Cow position: | chr9:6757396-6757746 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 176 |
| Conread position: | 1-364 |
| Cow position: | chr9:25023478-25023117 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 336 |
| Conread position: | 1-364 |
| Cow position: | chr9:29628923-29628563 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 257 |
| Conread position: | 1-364 |
| Cow position: | chr9:31020632-31021004 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 349 |
| Conread position: | 1-364 |
| Cow position: | chr9:31807357-31807717 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 268 |
| Conread position: | 1-364 |
| Cow position: | chr9:60278198-60277838 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 186 |
| Conread position: | 1-370 |
| Cow position: | chr9:37129713-37129356 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 75 |
| Conread position: | 1-370 |
| Cow position: | chr9:59443676-59444039 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 62 |
| Conread position: | 1-392 |
| Cow position: | chr9:42568694-42569080 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 327 |
| Conread position: | 1-405 |
| Cow position: | chr9:3356165-3355759 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 1-415 |
| Cow position: | chr9:3024922-3025348 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 1-629 |
| Cow position: | chr9:4672431-4673056 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 1-737 |
| Cow position: | chr9:64158947-64159698 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 2-286 |
| Cow position: | chr9:1252143-1251867 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-307 |
| Cow position: | chr9:5003826-5004128 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-314 |
| Cow position: | chr9:37971382-37971074 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-315 |
| Cow position: | chr9:3567028-3566715 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 66 |
| Conread position: | 2-326 |
| Cow position: | chr9:25483698-25484022 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 238 |
| Conread position: | 2-356 |
| Cow position: | chr9:18836834-18837196 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 133 |
| Conread position: | 2-370 |
| Cow position: | chr9:2185786-2186154 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 48 |
| Conread position: | 2-734 |
| Cow position: | chr9:3726104-3726851 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 3-149 |
| Cow position: | chr9:7002378-7002524 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-291 |
| Cow position: | chr9:4280282-4280569 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 213 |
| Conread position: | 3-403 |
| Cow position: | chr9:35657781-35658174 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 292, 44 |
| Conread position: | 3-413 |
| Cow position: | chr9:39992745-39993154 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 3-414 |
| Cow position: | chr9:64118653-64119056 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 25 |
| Conread position: | 4-334 |
| Cow position: | chr9:15072343-15072671 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 73 |
| Conread position: | 4-355 |
| Cow position: | chr9:34992208-34992570 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 340 |
| Conread position: | 4-358 |
| Cow position: | chr9:28626214-28625860 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 4-364 |
| Cow position: | chr9:3155859-3156210 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 60 |
| Conread position: | 5-276 |
| Cow position: | chr9:222721-222449 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 97 |
| Conread position: | 6-286 |
| Cow position: | chr9:55617165-55617438 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 6-530 |
| Cow position: | chr9:13477379-13476866 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 64 |
| Conread position: | 8-325 |
| Cow position: | chr9:59510622-59510939 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 8-333 |
| Cow position: | chr9:16268202-16268528 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 14-183 |
| Cow position: | chr9:870205-870041 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 14-337 |
| Cow position: | chr9:3586205-3586528 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 99 |
| Conread position: | 14-432 |
| Cow position: | chr9:6973964-6974387 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 109 |
| Conread position: | 15-231 |
| Cow position: | chr9:3867670-3867462 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 19-185 |
| Cow position: | chr9:2064834-2064669 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 19-330 |
| Cow position: | chr9:7012176-7012473 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 290, 24 |
| Conread position: | 20-335 |
| Cow position: | chr9:12845708-12845393 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 25-326 |
| Cow position: | chr9:32968815-32969116 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 229 |
| Conread position: | 28-181 |
| Cow position: | chr9:829372-829219 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-326 |
| Cow position: | chr9:51182343-51182045 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 34-291 |
| Cow position: | chr9:12120431-12120689 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 127, 45 |
| Conread position: | 34-353 |
| Cow position: | chr9:1979835-1980157 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 38-314 |
| Cow position: | chr9:47002050-47002325 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 38-343 |
| Cow position: | chr9:163643-163337 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 0 |
| Conread position: | 40-269 |
| Cow position: | chr9:22410250-22410024 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 214, 32 |
| Conread position: | 40-288 |
| Cow position: | chr9:2052306-2052558 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 139, 204 |
| Conread position: | 43-388 |
| Cow position: | chr9:3394119-3393777 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 227, 187 |
| Conread position: | 44-307 |
| Cow position: | chr9:43662826-43663075 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 153 |
| Conread position: | 44-372 |
| Cow position: | chr9:1635418-1635736 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 63-257 |
| Cow position: | chr9:34719855-34720052 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 69-326 |
| Cow position: | chr9:40191785-40191527 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 81-360 |
| Cow position: | chr9:15683840-15684112 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 228, 27 |
| Conread position: | 84-259 |
| Cow position: | chr9:2475195-2475368 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 86-297 |
| Cow position: | chr9:18067311-18067100 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 86-334 |
| Cow position: | chr9:54361344-54361588 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 91-334 |
| Cow position: | chr9:64018545-64018302 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 10 |
| Conread position: | 95-403 |
| Cow position: | chr9:37095111-37095421 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 199 |
| Conread position: | 101-413 |
| Cow position: | chr9:6111071-6110755 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 33 |
| Conread position: | 101-413 |
| Cow position: | chr9:39040497-39040811 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 121-302 |
| Cow position: | chr9:3227439-3227261 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 51 |
| Conread position: | 133-326 |
| Cow position: | chr9:22653521-22653715 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 133-509 |
| Cow position: | chr9:44817814-44818201 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 136-343 |
| Cow position: | chr9:49177869-49177661 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 141-425 |
| Cow position: | chr9:20309568-20309282 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 189 |
| Conread position: | 151-272 |
| Cow position: | chr9:6830527-6830406 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-326 |
| Cow position: | chr9:31064408-31064582 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 159-377 |
| Cow position: | chr9:8968968-8968761 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 150, 127 |
| Conread position: | 164-326 |
| Cow position: | chr9:18509817-18509654 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 165-324 |
| Cow position: | chr9:2488144-2487983 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 166-413 |
| Cow position: | chr9:3937833-3937581 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 152, 78 |
| Conread position: | 176-315 |
| Cow position: | chr9:7002519-7002658 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-326 |
| Cow position: | chr9:60651711-60651563 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 203-410 |
| Cow position: | chr9:3803067-3803280 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 251-425 |
| Cow position: | chr9:13222406-13222581 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 58, 166 |
| Conread position: | 293-496 |
| Cow position: | chr9:44794578-44794786 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 562-723 |
| Cow position: | chr9:3354690-3354531 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 566-731 |
| Cow position: | chr9:43663556-43663718 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 117 |
| Conread position: | 599-735 |
| Cow position: | chr9:28688118-28688257 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 599-736 |
| Cow position: | chr9:34721500-34721632 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 602-736 |
| Cow position: | chr9:13476857-13476730 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 608-732 |
| Cow position: | chr9:44795110-44795232 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.