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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8032D15.5
        

               
Conread position:
               
1-105
               

               
Cow position:
               
chr18:20174277-20174176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr18:43555673-43555568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr18:10861579-10861450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr18:3066229-3066498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:10516989-10517275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:15340595-15340318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:51975923-51976204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
60-282
               

               
Cow position:
               
chr18:32960033-32960261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
72-268
               

               
Cow position:
               
chr18:49440807-49441011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
94-274
               

               
Cow position:
               
chr18:14172223-14172039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
94-282
               

               
Cow position:
               
chr18:18844006-18844189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
96-268
               

               
Cow position:
               
chr18:38937812-38937988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
96-273
               

               
Cow position:
               
chr18:51383406-51383227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
96-274
               

               
Cow position:
               
chr18:22790093-22789916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
96-280
               

               
Cow position:
               
chr18:15613869-15613684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
96-281
               

               
Cow position:
               
chr18:15809809-15809629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr18:12023646-12023459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
96-284
               

               
Cow position:
               
chr18:697226-697035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
96-288
               

               
Cow position:
               
chr18:27637487-27637680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
97-283
               

               
Cow position:
               
chr18:5189701-5189510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr18:51395893-51395709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
97-288
               

               
Cow position:
               
chr18:30786736-30786919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
98-249
               

               
Cow position:
               
chr18:26586621-26586463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
98-253
               

               
Cow position:
               
chr18:12273651-12273807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
98-256
               

               
Cow position:
               
chr18:247700-247541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
98-259
               

               
Cow position:
               
chr18:55499065-55499229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
98-262
               

               
Cow position:
               
chr18:43014872-43014708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
98-266
               

               
Cow position:
               
chr18:21782679-21782851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
98-268
               

               
Cow position:
               
chr18:42290334-42290165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
98-276
               

               
Cow position:
               
chr18:42293062-42292889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
98-279
               

               
Cow position:
               
chr18:7956141-7956329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
98-282
               

               
Cow position:
               
chr18:21751371-21751564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
98-282
               

               
Cow position:
               
chr18:31672519-31672337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
98-283
               

               
Cow position:
               
chr18:41553376-41553182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
98-289
               

               
Cow position:
               
chr18:51643372-51643181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr18:53053241-53053038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 183
               

               
Conread position:
               
99-278
               

               
Cow position:
               
chr18:28322651-28322831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
100-230
               

               
Cow position:
               
chr18:46647165-46647033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
100-279
               

               
Cow position:
               
chr18:30586230-30586055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
100-292
               

               
Cow position:
               
chr18:27078859-27079059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
100-294
               

               
Cow position:
               
chr18:4851488-4851291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
100-298
               

               
Cow position:
               
chr18:4264403-4264199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
101-283
               

               
Cow position:
               
chr18:23941625-23941433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
102-234
               

               
Cow position:
               
chr18:47920743-47920883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
102-269
               

               
Cow position:
               
chr18:20271016-20270842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
102-296
               

               
Cow position:
               
chr18:44514084-44514282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 168
               

               
Conread position:
               
104-249
               

               
Cow position:
               
chr18:41253540-41253692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
105-289
               

               
Cow position:
               
chr18:51675282-51675090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
105-293
               

               
Cow position:
               
chr18:1571236-1571046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
107-281
               

               
Cow position:
               
chr18:2144574-2144751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
107-281
               

               
Cow position:
               
chr18:21051080-21050911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
108-229
               

               
Cow position:
               
chr18:858828-858954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
108-234
               

               
Cow position:
               
chr18:49038466-49038593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
108-238
               

               
Cow position:
               
chr18:23821828-23821691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-249
               

               
Cow position:
               
chr18:4758029-4757885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-252
               

               
Cow position:
               
chr18:24266403-24266251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-252
               

               
Cow position:
               
chr18:37382089-37381939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-253
               

               
Cow position:
               
chr18:26998889-26999042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-253
               

               
Cow position:
               
chr18:40047494-40047351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
108-253
               

               
Cow position:
               
chr18:47486048-47486199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-255
               

               
Cow position:
               
chr18:35874082-35874233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
108-257
               

               
Cow position:
               
chr18:9895990-9895840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
108-262
               

               
Cow position:
               
chr18:24759652-24759498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
108-263
               

               
Cow position:
               
chr18:42427624-42427779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-267
               

               
Cow position:
               
chr18:23653114-23652946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
108-267
               

               
Cow position:
               
chr18:41702838-41703001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-268
               

               
Cow position:
               
chr18:46048756-46048922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
108-269
               

               
Cow position:
               
chr18:47802087-47801927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
108-270
               

               
Cow position:
               
chr18:5647817-5647978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-271
               

               
Cow position:
               
chr18:8171081-8170919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-271
               

               
Cow position:
               
chr18:19809678-19809512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-271
               

               
Cow position:
               
chr18:30341180-30341012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-271
               

               
Cow position:
               
chr18:51192736-51192577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr18:12059001-12059165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr18:17974634-17974796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr18:44044339-44044168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr18:44909057-44909224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr18:45903893-45903726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-272
               

               
Cow position:
               
chr18:49281059-49280891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-273
               

               
Cow position:
               
chr18:24719317-24719482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:346494-346321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:3211882-3212054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:5632272-5632439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:36734559-36734386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:39460224-39460390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:44206080-44205920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:45897735-45897900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr18:50359336-50359499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
108-275
               

               
Cow position:
               
chr18:8208421-8208249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 163
               

               
Conread position:
               
108-275
               

               
Cow position:
               
chr18:9846406-9846244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
108-275
               

               
Cow position:
               
chr18:18918954-18918788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
108-276
               

               
Cow position:
               
chr18:16313383-16313553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
108-276
               

               
Cow position:
               
chr18:50004701-50004531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr18:6005495-6005322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr18:9818772-9818940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr18:17195341-17195167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr18:25598228-25598053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr18:35950039-35950224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr18:46276298-46276120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr18:49161299-49161121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
108-280
               

               
Cow position:
               
chr18:38601880-38601701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
108-280
               

               
Cow position:
               
chr18:50632438-50632262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr18:7951119-7951296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr18:11330223-11330404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr18:18689095-18688927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr18:36098370-36098539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr18:45185876-45186050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-281
               

               
Cow position:
               
chr18:49603039-49602862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:3518270-3518437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:14201239-14201057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:14874556-14874738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:16381862-16382043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:19688028-19688211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:19868257-19868076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:21187310-21187481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:21969801-21969618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:23447057-23446884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:30225526-30225346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:36190998-36190817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:39860767-39860595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:44262634-44262801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:47175377-47175196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr18:55692820-55693001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr18:9010712-9010886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr18:43283752-43283574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr18:43796951-43796776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr18:44917761-44917936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr18:53795485-53795667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-284
               

               
Cow position:
               
chr18:56463726-56463543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
108-285
               

               
Cow position:
               
chr18:23630603-23630431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-286
               

               
Cow position:
               
chr18:10322810-10322983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-286
               

               
Cow position:
               
chr18:22328147-22328332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-287
               

               
Cow position:
               
chr18:19765193-19765373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
108-287
               

               
Cow position:
               
chr18:35452930-35453116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr18:1931454-1931273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr18:3180415-3180598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr18:11856905-11857084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-289
               

               
Cow position:
               
chr18:7109134-7109322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-289
               

               
Cow position:
               
chr18:17390989-17390803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
108-290
               

               
Cow position:
               
chr18:47417006-47417192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
108-291
               

               
Cow position:
               
chr18:35857920-35857732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-291
               

               
Cow position:
               
chr18:56181451-56181269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
108-292
               

               
Cow position:
               
chr18:19143506-19143310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr18:2793967-2793783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr18:4000350-4000543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr18:23169582-23169775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr18:44137496-44137688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr18:45898896-45899088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr18:51405902-51405723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr18:55549733-55549926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-294
               

               
Cow position:
               
chr18:10051751-10051942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-296
               

               
Cow position:
               
chr18:52251853-52251659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-297
               

               
Cow position:
               
chr18:49040612-49040409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
108-298
               

               
Cow position:
               
chr18:42432085-42431891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
108-300
               

               
Cow position:
               
chr18:23648926-23649127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-304
               

               
Cow position:
               
chr18:12584835-12584639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-306
               

               
Cow position:
               
chr18:23615872-23615672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
108-307
               

               
Cow position:
               
chr18:20641492-20641298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
108-311
               

               
Cow position:
               
chr18:9029614-9029826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-322
               

               
Cow position:
               
chr18:31159269-31159055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
108-359
               

               
Cow position:
               
chr18:5078769-5078531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
109-260
               

               
Cow position:
               
chr18:33158947-33159103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
109-271
               

               
Cow position:
               
chr18:11657662-11657830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
109-272
               

               
Cow position:
               
chr18:5072405-5072245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
109-274
               

               
Cow position:
               
chr18:4718264-4718434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
109-279
               

               
Cow position:
               
chr18:3709235-3709410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
109-280
               

               
Cow position:
               
chr18:9089704-9089871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
109-280
               

               
Cow position:
               
chr18:39115113-39114937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr18:18568998-18569157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
110-234
               

               
Cow position:
               
chr18:2774132-2774002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
110-252
               

               
Cow position:
               
chr18:24022624-24022767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
110-263
               

               
Cow position:
               
chr18:20174123-20173974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-265
               

               
Cow position:
               
chr18:39710113-39710280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
110-266
               

               
Cow position:
               
chr18:238110-237947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
110-268
               

               
Cow position:
               
chr18:37303158-37303322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-269
               

               
Cow position:
               
chr18:55747692-55747857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
110-272
               

               
Cow position:
               
chr18:1399348-1399180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
110-272
               

               
Cow position:
               
chr18:39662785-39662953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
110-272
               

               
Cow position:
               
chr18:45558154-45558314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-273
               

               
Cow position:
               
chr18:39623806-39623977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-274
               

               
Cow position:
               
chr18:8975402-8975566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-274
               

               
Cow position:
               
chr18:36501072-36500908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
110-274
               

               
Cow position:
               
chr18:52387214-52387044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr18:7965238-7965413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr18:21528653-21528831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr18:37187991-37187815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr18:48092911-48092734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 163
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr18:14586464-14586297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr18:14871598-14871421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr18:16760525-16760704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr18:21401295-21401115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr18:23380137-23380307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr18:29371873-29372052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr18:35827368-35827196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-283
               

               
Cow position:
               
chr18:10214185-10214010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
110-283
               

               
Cow position:
               
chr18:35837617-35837444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
110-287
               

               
Cow position:
               
chr18:18664367-18664178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
110-288
               

               
Cow position:
               
chr18:33492366-33492535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-288
               

               
Cow position:
               
chr18:49970647-49970465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
110-288
               

               
Cow position:
               
chr18:50974288-50974103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr18:4495880-4495696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr18:16659426-16659237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr18:24946093-24946273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr18:52691720-52691909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chr18:3412367-3412558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chr18:11233420-11233616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
110-298
               

               
Cow position:
               
chr18:39811577-39811385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
110-314
               

               
Cow position:
               
chr18:22045407-22045193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
111-263
               

               
Cow position:
               
chr18:7134283-7134444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
111-279
               

               
Cow position:
               
chr18:31557153-31556980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
111-283
               

               
Cow position:
               
chr18:35795215-35795037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
111-283
               

               
Cow position:
               
chr18:41257912-41257734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
111-287
               

               
Cow position:
               
chr18:54572283-54572105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
111-289
               

               
Cow position:
               
chr18:728033-728209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
111-290
               

               
Cow position:
               
chr18:4485606-4485787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
111-293
               

               
Cow position:
               
chr18:52382911-52383102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
112-285
               

               
Cow position:
               
chr18:7415023-7414846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chr18:1144175-1144024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
113-272
               

               
Cow position:
               
chr18:51757103-51757267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
113-280
               

               
Cow position:
               
chr18:46880696-46880526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr18:43950835-43951010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
114-256
               

               
Cow position:
               
chr18:19143962-19143814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
114-268
               

               
Cow position:
               
chr18:31727634-31727476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 145
               

               
Conread position:
               
114-274
               

               
Cow position:
               
chr18:32002-32164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
114-282
               

               
Cow position:
               
chr18:10668343-10668516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
114-282
               

               
Cow position:
               
chr18:45573390-45573562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
116-297
               

               
Cow position:
               
chr18:40281087-40280898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
117-289
               

               
Cow position:
               
chr18:11867355-11867524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
118-282
               

               
Cow position:
               
chr18:48290213-48290055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr18:34490296-34490468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
120-282
               

               
Cow position:
               
chr18:33364229-33364393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
121-260
               

               
Cow position:
               
chr18:10758037-10757897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-260
               

               
Cow position:
               
chr18:28540094-28539950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
121-268
               

               
Cow position:
               
chr18:135636-135492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
121-271
               

               
Cow position:
               
chr18:47868623-47868767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-273
               

               
Cow position:
               
chr18:19229936-19230095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
121-280
               

               
Cow position:
               
chr18:10117758-10117915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr18:4907165-4907326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr18:32253491-32253327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr18:33757035-33757195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr18:34389365-34389198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr18:35171366-35171529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-286
               

               
Cow position:
               
chr18:4857706-4857535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
121-294
               

               
Cow position:
               
chr18:30676641-30676460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
121-296
               

               
Cow position:
               
chr18:23810102-23809928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
121-299
               

               
Cow position:
               
chr18:37690168-37690351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
122-247
               

               
Cow position:
               
chr18:48112948-48112819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
122-280
               

               
Cow position:
               
chr18:47680533-47680691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
122-280
               

               
Cow position:
               
chr18:47865090-47865248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
122-281
               

               
Cow position:
               
chr18:15279665-15279824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
122-282
               

               
Cow position:
               
chr18:42967131-42967285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
122-282
               

               
Cow position:
               
chr18:46880144-46879979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 149
               

               
Conread position:
               
122-298
               

               
Cow position:
               
chr18:49126998-49126823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
123-247
               

               
Cow position:
               
chr18:49655706-49655828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
123-281
               

               
Cow position:
               
chr18:38211176-38211338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
124-268
               

               
Cow position:
               
chr18:45897706-45897565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
124-279
               

               
Cow position:
               
chr18:7487253-7487414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
125-268
               

               
Cow position:
               
chr18:18956861-18956714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
126-282
               

               
Cow position:
               
chr18:32992406-32992565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
127-276
               

               
Cow position:
               
chr18:25757292-25757138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
127-281
               

               
Cow position:
               
chr18:20998391-20998229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
128-280
               

               
Cow position:
               
chr18:29264330-29264187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
132-266
               

               
Cow position:
               
chr18:36296713-36296581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
133-266
               

               
Cow position:
               
chr18:35235993-35235854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
133-282
               

               
Cow position:
               
chr18:17756915-17756760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
134-266
               

               
Cow position:
               
chr18:18520770-18520635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
134-271
               

               
Cow position:
               
chr18:1735568-1735427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
134-274
               

               
Cow position:
               
chr18:26355014-26354867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
138-274
               

               
Cow position:
               
chr18:22180742-22180607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
138-293
               

               
Cow position:
               
chr18:26647594-26647749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
141-283
               

               
Cow position:
               
chr18:641275-641136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
150-278
               

               
Cow position:
               
chr18:30295558-30295430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
150-282
               

               
Cow position:
               
chr18:21410734-21410868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
162-281
               

               
Cow position:
               
chr18:20462646-20462526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
168-282
               

               
Cow position:
               
chr18:35581985-35581870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
173-274
               

               
Cow position:
               
chr18:20226192-20226296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
184-331
               

               
Cow position:
               
chr18:48548833-48548971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
186-280
               

               
Cow position:
               
chr18:34762348-34762254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-303
               

               
Cow position:
               
chr18:24529751-24529636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
190-301
               

               
Cow position:
               
chr18:40476088-40475975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
193-296
               

               
Cow position:
               
chr18:35904984-35904883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
197-282
               

               
Cow position:
               
chr18:41009123-41009209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
200-279
               

               
Cow position:
               
chr18:47521411-47521332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
80
               

               
Alignm identity:
               
72
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
443-626
               

               
Cow position:
               
chr18:51331069-51331244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
445-626
               

               
Cow position:
               
chr18:46457081-46456911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.