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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8032D15.5
        

               
Conread position:
               
1-105
               

               
Cow position:
               
chr20:17251643-17251747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
1-105
               

               
Cow position:
               
chr20:41883662-41883762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr20:20312819-20312715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr20:21714683-21714788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr20:37357534-37357640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr20:9473687-9473558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
4-108
               

               
Cow position:
               
chr20:37200289-37200394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr20:41973820-41973535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
7-108
               

               
Cow position:
               
chr20:23506536-23506438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
7-108
               

               
Cow position:
               
chr20:24391912-24392011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr20:12334308-12334597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
9-156
               

               
Cow position:
               
chr20:354961-354818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
92-250
               

               
Cow position:
               
chr20:398239-398086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
96-253
               

               
Cow position:
               
chr20:32847416-32847571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
96-279
               

               
Cow position:
               
chr20:20590234-20590046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
96-282
               

               
Cow position:
               
chr20:26041031-26040838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
97-273
               

               
Cow position:
               
chr20:14980437-14980259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
97-281
               

               
Cow position:
               
chr20:13829329-13829518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 145
               

               
Conread position:
               
97-288
               

               
Cow position:
               
chr20:1824560-1824364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
98-257
               

               
Cow position:
               
chr20:14879858-14880019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
98-258
               

               
Cow position:
               
chr20:23850690-23850855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 129
               

               
Conread position:
               
98-267
               

               
Cow position:
               
chr20:13876638-13876466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
98-268
               

               
Cow position:
               
chr20:3599331-3599158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
98-268
               

               
Cow position:
               
chr20:4334461-4334294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
98-268
               

               
Cow position:
               
chr20:6240451-6240275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
98-271
               

               
Cow position:
               
chr20:40303819-40303635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
98-278
               

               
Cow position:
               
chr20:5364994-5365182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
98-278
               

               
Cow position:
               
chr20:19919747-19919564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
98-288
               

               
Cow position:
               
chr20:11499076-11499270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
98-288
               

               
Cow position:
               
chr20:37919301-37919111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr20:35741837-35742040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
98-298
               

               
Cow position:
               
chr20:34097884-34097673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
99-293
               

               
Cow position:
               
chr20:297937-297736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
21, 179
               

               
Conread position:
               
101-281
               

               
Cow position:
               
chr20:35310398-35310586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
101-284
               

               
Cow position:
               
chr20:34083790-34083981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
101-290
               

               
Cow position:
               
chr20:28249255-28249451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
101-297
               

               
Cow position:
               
chr20:14739744-14739552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
102-280
               

               
Cow position:
               
chr20:24491955-24491772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
102-281
               

               
Cow position:
               
chr20:35605284-35605459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
102-282
               

               
Cow position:
               
chr20:28982775-28982954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
102-285
               

               
Cow position:
               
chr20:10208882-10209066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
103-283
               

               
Cow position:
               
chr20:3564233-3564413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
104-282
               

               
Cow position:
               
chr20:5268766-5268584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
105-263
               

               
Cow position:
               
chr20:19636099-19635939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
107-249
               

               
Cow position:
               
chr20:14607832-14607688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
107-252
               

               
Cow position:
               
chr20:6848974-6849123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
107-291
               

               
Cow position:
               
chr20:17370172-17369978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
107-300
               

               
Cow position:
               
chr20:37609701-37609898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
108-237
               

               
Cow position:
               
chr20:25474633-25474769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
108-243
               

               
Cow position:
               
chr20:18831798-18831661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-244
               

               
Cow position:
               
chr20:22959267-22959125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
108-249
               

               
Cow position:
               
chr20:354821-354673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-249
               

               
Cow position:
               
chr20:20934652-20934509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-255
               

               
Cow position:
               
chr20:5702804-5702953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-258
               

               
Cow position:
               
chr20:33076743-33076587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
108-259
               

               
Cow position:
               
chr20:38664172-38664328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
108-260
               

               
Cow position:
               
chr20:8578329-8578491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
108-260
               

               
Cow position:
               
chr20:34847986-34848139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
108-263
               

               
Cow position:
               
chr20:5703551-5703711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
108-263
               

               
Cow position:
               
chr20:25009552-25009394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-264
               

               
Cow position:
               
chr20:11008250-11008413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
108-264
               

               
Cow position:
               
chr20:17544704-17544867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-268
               

               
Cow position:
               
chr20:15760493-15760324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
108-268
               

               
Cow position:
               
chr20:22922998-22923158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-271
               

               
Cow position:
               
chr20:6248521-6248352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-271
               

               
Cow position:
               
chr20:12581874-12581709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-273
               

               
Cow position:
               
chr20:14283000-14283172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-273
               

               
Cow position:
               
chr20:16977764-16977586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr20:22851558-22851726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr20:31845205-31845038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-274
               

               
Cow position:
               
chr20:32523544-32523713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-275
               

               
Cow position:
               
chr20:7738151-7737984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr20:3141654-3141830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr20:13994897-13995065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr20:24711921-24712095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-280
               

               
Cow position:
               
chr20:28935559-28935386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
108-280
               

               
Cow position:
               
chr20:39417823-39417646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:391977-392155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:1293950-1293769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:4999032-4998846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:5814646-5814823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:11359552-11359382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:25021508-25021690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:27315058-27315233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:28296374-28296556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:30639703-30639519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:30744641-30744462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:41089716-41089534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
108-282
               

               
Cow position:
               
chr20:41514842-41515024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr20:7934363-7934539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
108-283
               

               
Cow position:
               
chr20:36239327-36239509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-284
               

               
Cow position:
               
chr20:2298706-2298539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
108-285
               

               
Cow position:
               
chr20:16941208-16941024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
108-285
               

               
Cow position:
               
chr20:21210113-21210290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
108-285
               

               
Cow position:
               
chr20:28518103-28517918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
108-285
               

               
Cow position:
               
chr20:33435075-33434897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr20:14806967-14807147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr20:20967401-20967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-288
               

               
Cow position:
               
chr20:27624091-27624269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
108-289
               

               
Cow position:
               
chr20:15118356-15118544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
108-289
               

               
Cow position:
               
chr20:21279466-21279644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-291
               

               
Cow position:
               
chr20:11611759-11611948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-291
               

               
Cow position:
               
chr20:17251797-17251984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-292
               

               
Cow position:
               
chr20:9034136-9033948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
108-292
               

               
Cow position:
               
chr20:14897817-14898009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-292
               

               
Cow position:
               
chr20:17840825-17841009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr20:7447281-7447087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-294
               

               
Cow position:
               
chr20:20459672-20459863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
108-294
               

               
Cow position:
               
chr20:25464965-25464776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
108-294
               

               
Cow position:
               
chr20:39325471-39325661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
108-296
               

               
Cow position:
               
chr20:11920650-11920464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
108-298
               

               
Cow position:
               
chr20:8069605-8069794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
108-298
               

               
Cow position:
               
chr20:18763219-18763413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
108-302
               

               
Cow position:
               
chr20:20202299-20202497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
108-303
               

               
Cow position:
               
chr20:21345513-21345721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
108-306
               

               
Cow position:
               
chr20:37357936-37358141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-315
               

               
Cow position:
               
chr20:6054429-6054217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
108-324
               

               
Cow position:
               
chr20:29990367-29990147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
108-379
               

               
Cow position:
               
chr20:5078352-5078624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
109-237
               

               
Cow position:
               
chr20:2743056-2742921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
109-249
               

               
Cow position:
               
chr20:10188356-10188500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
109-249
               

               
Cow position:
               
chr20:33067279-33067134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
109-253
               

               
Cow position:
               
chr20:7426116-7425969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
109-268
               

               
Cow position:
               
chr20:8679582-8679416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
109-271
               

               
Cow position:
               
chr20:39016791-39016622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
109-272
               

               
Cow position:
               
chr20:3255117-3255283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
109-274
               

               
Cow position:
               
chr20:20158217-20158379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
109-274
               

               
Cow position:
               
chr20:23880026-23879856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
109-281
               

               
Cow position:
               
chr20:41313468-41313635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
109-282
               

               
Cow position:
               
chr20:14433340-14433162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
109-284
               

               
Cow position:
               
chr20:34221560-34221739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
109-285
               

               
Cow position:
               
chr20:9379572-9379744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr20:34251591-34251405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
110-239
               

               
Cow position:
               
chr20:10245971-10245841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-250
               

               
Cow position:
               
chr20:9433669-9433808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
110-267
               

               
Cow position:
               
chr20:12126222-12126058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
110-268
               

               
Cow position:
               
chr20:33462308-33462473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-269
               

               
Cow position:
               
chr20:34202717-34202887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
110-270
               

               
Cow position:
               
chr20:35442200-35442036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 157
               

               
Conread position:
               
110-273
               

               
Cow position:
               
chr20:6473815-6473984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
110-273
               

               
Cow position:
               
chr20:31468580-31468407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-274
               

               
Cow position:
               
chr20:2798909-2798745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
110-274
               

               
Cow position:
               
chr20:20124951-20124781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
110-277
               

               
Cow position:
               
chr20:7417085-7416907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr20:1139685-1139509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr20:23428460-23428296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr20:14490328-14490501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr20:24883283-24883105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
110-283
               

               
Cow position:
               
chr20:35589602-35589426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
110-288
               

               
Cow position:
               
chr20:11548642-11548467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
110-291
               

               
Cow position:
               
chr20:21941516-21941691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr20:19328470-19328668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr20:25953346-25953541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr20:33359391-33359199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chr20:17470805-17470983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-297
               

               
Cow position:
               
chr20:5950561-5950365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
110-298
               

               
Cow position:
               
chr20:4892037-4891846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
110-300
               

               
Cow position:
               
chr20:12782943-12782752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
110-301
               

               
Cow position:
               
chr20:27323348-27323542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
111-253
               

               
Cow position:
               
chr20:16291771-16291920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
111-274
               

               
Cow position:
               
chr20:36097603-36097773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
111-279
               

               
Cow position:
               
chr20:10200429-10200605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
111-283
               

               
Cow position:
               
chr20:14755757-14755585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
112-293
               

               
Cow position:
               
chr20:29768587-29768783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
112-298
               

               
Cow position:
               
chr20:2316341-2316156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr20:13023417-13023244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
113-282
               

               
Cow position:
               
chr20:27476929-27476753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
114-268
               

               
Cow position:
               
chr20:21018510-21018666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
114-271
               

               
Cow position:
               
chr20:34271413-34271577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
114-274
               

               
Cow position:
               
chr20:19201617-19201784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
114-281
               

               
Cow position:
               
chr20:21344553-21344725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
114-281
               

               
Cow position:
               
chr20:35146107-35146270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
114-284
               

               
Cow position:
               
chr20:23541074-23540912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
114-293
               

               
Cow position:
               
chr20:4755747-4755565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
6, 60
               

               
Conread position:
               
115-273
               

               
Cow position:
               
chr20:11340717-11340556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 122
               

               
Conread position:
               
118-241
               

               
Cow position:
               
chr20:3012228-3012106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
118-286
               

               
Cow position:
               
chr20:36741554-36741725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
119-266
               

               
Cow position:
               
chr20:11661231-11661086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
120-283
               

               
Cow position:
               
chr20:11135661-11135492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
121-267
               

               
Cow position:
               
chr20:17606873-17606721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
121-272
               

               
Cow position:
               
chr20:28605303-28605454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
121-274
               

               
Cow position:
               
chr20:9376563-9376711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
121-274
               

               
Cow position:
               
chr20:38061672-38061523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-280
               

               
Cow position:
               
chr20:17733465-17733299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-280
               

               
Cow position:
               
chr20:18500621-18500786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr20:5172706-5172868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr20:19237169-19237330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
121-282
               

               
Cow position:
               
chr20:37273092-37273251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-287
               

               
Cow position:
               
chr20:4945160-4944987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
121-289
               

               
Cow position:
               
chr20:16566391-16566554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
121-298
               

               
Cow position:
               
chr20:6501981-6502164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
122-284
               

               
Cow position:
               
chr20:10715279-10715444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
122-295
               

               
Cow position:
               
chr20:32636235-32636064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
123-260
               

               
Cow position:
               
chr20:17524368-17524511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
123-263
               

               
Cow position:
               
chr20:31148254-31148390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
123-274
               

               
Cow position:
               
chr20:3035429-3035589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
123-282
               

               
Cow position:
               
chr20:26424502-26424663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
125-273
               

               
Cow position:
               
chr20:40578569-40578424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
126-274
               

               
Cow position:
               
chr20:7155277-7155427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
126-274
               

               
Cow position:
               
chr20:42897878-42897722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
127-277
               

               
Cow position:
               
chr20:29754876-29755032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
127-292
               

               
Cow position:
               
chr20:14460481-14460654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
129-289
               

               
Cow position:
               
chr20:7926938-7927097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
132-282
               

               
Cow position:
               
chr20:21169657-21169512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
135-281
               

               
Cow position:
               
chr20:10486250-10486099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
139-249
               

               
Cow position:
               
chr20:30817630-30817746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
139-279
               

               
Cow position:
               
chr20:19623132-19622991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
139-283
               

               
Cow position:
               
chr20:13034218-13034075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
143-282
               

               
Cow position:
               
chr20:19899426-19899563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
144-285
               

               
Cow position:
               
chr20:20892561-20892415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
146-281
               

               
Cow position:
               
chr20:11909568-11909428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
153-282
               

               
Cow position:
               
chr20:13283424-13283299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 22
               

               
Conread position:
               
155-279
               

               
Cow position:
               
chr20:5024834-5024713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
156-297
               

               
Cow position:
               
chr20:17755281-17755143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
157-287
               

               
Cow position:
               
chr20:24117304-24117175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
164-291
               

               
Cow position:
               
chr20:17764978-17764851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
165-268
               

               
Cow position:
               
chr20:24522485-24522588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
165-293
               

               
Cow position:
               
chr20:26562079-26561944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
166-288
               

               
Cow position:
               
chr20:10052885-10053007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
168-283
               

               
Cow position:
               
chr20:15489434-15489551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
173-288
               

               
Cow position:
               
chr20:36365964-36366084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
184-282
               

               
Cow position:
               
chr20:31311690-31311790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
192-282
               

               
Cow position:
               
chr20:10101071-10100980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               
Show alignments to all cow chromosomes.