Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-117
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-149
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 1-149
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-208
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 172

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-151
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 62

Conread position: 2-154
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-204
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 165

Conread position: 2-206
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 175

Conread position: 4-159
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 22-380
Cow position:
Alignm length: 373
Alignm identity: 241
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 87

Conread position: 114-634
Cow position:
Alignm length: 544
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 139-318
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 17

Conread position: 139-611
Cow position:
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 139-611
Cow position:
Alignm length: 501
Alignm identity: 333
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 13

Conread position: 139-613
Cow position:
Alignm length: 489
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 151-611
Cow position:
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 209

Conread position: 151-611
Cow position:
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 123

Conread position: 152-314
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 152-356
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 63

Conread position: 152-427
Cow position:
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 264

Conread position: 152-517
Cow position:
Alignm length: 378
Alignm identity: 261
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 71

Conread position: 152-592
Cow position:
Alignm length: 459
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-611
Cow position:
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 152-613
Cow position:
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 151

Conread position: 152-618
Cow position:
Alignm length: 485
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 209

Conread position: 152-618
Cow position:
Alignm length: 485
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-618
Cow position:
Alignm length: 484
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 62

Conread position: 152-618
Cow position:
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 152-619
Cow position:
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 152-619
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 278

Conread position: 152-619
Cow position:
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 236

Conread position: 152-619
Cow position:
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 313

Conread position: 152-655
Cow position:
Alignm length: 517
Alignm identity: 329
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 205

Conread position: 152-658
Cow position:
Alignm length: 536
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 140

Conread position: 153-319
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 153-319
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 153-319
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 114

Conread position: 153-354
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 197

Conread position: 153-355
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 202

Conread position: 153-372
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 61

Conread position: 153-409
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 13, 202

Conread position: 153-503
Cow position:
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-590
Cow position:
Alignm length: 447
Alignm identity: 289
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 193

Conread position: 153-611
Cow position:
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 471
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 220

Conread position: 153-611
Cow position:
Alignm length: 477
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-616
Cow position:
Alignm length: 486
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 153-620
Cow position:
Alignm length: 488
Alignm identity: 302
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 180

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 198

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 203

Conread position: 155-611
Cow position:
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 398

Conread position: 155-611
Cow position:
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 228

Conread position: 155-611
Cow position:
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-611
Cow position:
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 222

Conread position: 155-611
Cow position:
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 228

Conread position: 155-611
Cow position:
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 147

Conread position: 155-611
Cow position:
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 228

Conread position: 155-611
Cow position:
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 223

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 269

Conread position: 155-611
Cow position:
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 159-346
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 159-612
Cow position:
Alignm length: 468
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 42

Conread position: 165-636
Cow position:
Alignm length: 483
Alignm identity: 293
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 174

Conread position: 166-608
Cow position:
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 166-611
Cow position:
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 188

Conread position: 167-637
Cow position:
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 32

Conread position: 173-596
Cow position:
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 181

Conread position: 184-608
Cow position:
Alignm length: 443
Alignm identity: 299
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 169

Conread position: 185-528
Cow position:
Alignm length: 357
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 159

Conread position: 185-607
Cow position:
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 104

Conread position: 185-611
Cow position:
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 24

Conread position: 185-613
Cow position:
Alignm length: 440
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 185-613
Cow position:
Alignm length: 435
Alignm identity: 282
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 162

Conread position: 185-630
Cow position:
Alignm length: 459
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 169

Conread position: 185-632
Cow position:
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 163

Conread position: 185-659
Cow position:
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 103

Conread position: 186-468
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 38

Conread position: 186-658
Cow position:
Alignm length: 497
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 175

Conread position: 188-619
Cow position:
Alignm length: 444
Alignm identity: 306
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 66

Conread position: 190-528
Cow position:
Alignm length: 343
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 151, 76

Conread position: 190-572
Cow position:
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 190-618
Cow position:
Alignm length: 436
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 19

Conread position: 190-619
Cow position:
Alignm length: 437
Alignm identity: 293
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 129, 92

Conread position: 191-528
Cow position:
Alignm length: 346
Alignm identity: 243
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 128, 14

Conread position: 195-446
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 116

Conread position: 196-608
Cow position:
Alignm length: 421
Alignm identity: 271
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 108, 93

Conread position: 198-564
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 183

Conread position: 198-619
Cow position:
Alignm length: 426
Alignm identity: 278
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 237, 125

Conread position: 198-658
Cow position:
Alignm length: 468
Alignm identity: 306
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 87

Conread position: 205-618
Cow position:
Alignm length: 426
Alignm identity: 277
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 148

Conread position: 224-611
Cow position:
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 131

Conread position: 248-574
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 68, 101

Conread position: 248-622
Cow position:
Alignm length: 386
Alignm identity: 263
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 102

Conread position: 250-619
Cow position:
Alignm length: 383
Alignm identity: 253
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 69, 102

Conread position: 260-596
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 12

Conread position: 267-607
Cow position:
Alignm length: 353
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 87

Conread position: 277-611
Cow position:
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 81

Conread position: 282-619
Cow position:
Alignm length: 348
Alignm identity: 247
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 71

Conread position: 318-611
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 117, 15

Conread position: 325-612
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 22

Conread position: 325-619
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 111, 24

Conread position: 325-638
Cow position:
Alignm length: 331
Alignm identity: 231
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 224

Conread position: 327-610
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 102, 20

Conread position: 340-611
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 28

Conread position: 362-619
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 68, 161

Conread position: 366-613
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 68, 169

Conread position: 367-605
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 38

Conread position: 378-616
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 64

Conread position: 419-619
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 104

Show alignments to all cow chromosomes.