Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032H19.3 |
| Conread position: | 1-97 |
| Cow position: | chr11:47760524-47760427 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr11:19064083-19063921 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-151 |
| Cow position: | chr11:28108316-28108479 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr11:28229591-28229429 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-151 |
| Cow position: | chr11:36744015-36743852 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr11:64046164-64046327 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr11:64081917-64081754 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-159 |
| Cow position: | chr11:31874603-31874433 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 1-159 |
| Cow position: | chr11:45111789-45111956 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-159 |
| Cow position: | chr11:67450664-67450832 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-187 |
| Cow position: | chr11:62229360-62229553 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 1-188 |
| Cow position: | chr11:5343051-5342850 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 55, 165 |
| Conread position: | 1-206 |
| Cow position: | chr11:10217155-10216951 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 97, 50 |
| Conread position: | 1-206 |
| Cow position: | chr11:63655171-63654954 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 176 |
| Conread position: | 1-209 |
| Cow position: | chr11:40775829-40775615 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 11 |
| Conread position: | 2-143 |
| Cow position: | chr11:53431892-53431738 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr11:12358250-12358090 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr11:23877477-23877637 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr11:24393494-24393649 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 2-149 |
| Cow position: | chr11:26124754-26124600 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 2-149 |
| Cow position: | chr11:58134561-58134721 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-151 |
| Cow position: | chr11:10090849-10091011 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-151 |
| Cow position: | chr11:11988281-11988441 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-151 |
| Cow position: | chr11:43514462-43514301 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 3-204 |
| Cow position: | chr11:7116388-7116605 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 172 |
| Conread position: | 4-139 |
| Cow position: | chr11:85393636-85393488 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-159 |
| Cow position: | chr11:9606408-9606240 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 97-613 |
| Cow position: | chr11:58134860-58135391 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 30 |
| Conread position: | 102-619 |
| Cow position: | chr11:47759811-47759277 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 107-437 |
| Cow position: | chr11:77254249-77253924 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 108-634 |
| Cow position: | chr11:44252279-44252814 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 110-666 |
| Cow position: | chr11:1489660-1489110 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 134-341 |
| Cow position: | chr11:71982021-71981811 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 139-397 |
| Cow position: | chr11:27669821-27669561 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 139-613 |
| Cow position: | chr11:26070547-26070055 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 139-634 |
| Cow position: | chr11:29668096-29667595 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 141-447 |
| Cow position: | chr11:50027363-50027053 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 131 |
| Conread position: | 142-413 |
| Cow position: | chr11:44491721-44491463 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 143-612 |
| Cow position: | chr11:24336678-24336217 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 151-569 |
| Cow position: | chr11:54484891-54484467 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 210 |
| Conread position: | 151-619 |
| Cow position: | chr11:11988634-11989133 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 336 |
| Conread position: | 152-287 |
| Cow position: | chr11:4027037-4026896 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-319 |
| Cow position: | chr11:23877818-23877991 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-340 |
| Cow position: | chr11:20510919-20511117 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-450 |
| Cow position: | chr11:38219812-38219508 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 170 |
| Conread position: | 152-453 |
| Cow position: | chr11:12094091-12094397 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 152-596 |
| Cow position: | chr11:53431535-53431071 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 398 |
| Conread position: | 152-610 |
| Cow position: | chr11:29232486-29232024 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 152-611 |
| Cow position: | chr11:30123323-30122850 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 261 |
| Conread position: | 152-613 |
| Cow position: | chr11:12357893-12357419 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 210 |
| Conread position: | 152-613 |
| Cow position: | chr11:24393839-24394308 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 205 |
| Conread position: | 152-613 |
| Cow position: | chr11:26124403-26123935 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 207 |
| Conread position: | 152-613 |
| Cow position: | chr11:85393284-85392832 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 152-616 |
| Cow position: | chr11:3855757-3856213 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 152-618 |
| Cow position: | chr11:7110581-7110120 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 152-618 |
| Cow position: | chr11:10847974-10848449 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-618 |
| Cow position: | chr11:26548034-26548524 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 259 |
| Conread position: | 152-618 |
| Cow position: | chr11:43514109-43513635 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-618 |
| Cow position: | chr11:44582812-44582339 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 209 |
| Conread position: | 152-619 |
| Cow position: | chr11:4269879-4269401 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-619 |
| Cow position: | chr11:19101972-19101486 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-619 |
| Cow position: | chr11:31926695-31927156 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 139 |
| Conread position: | 152-619 |
| Cow position: | chr11:44156724-44156250 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-619 |
| Cow position: | chr11:71330116-71330595 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 152-630 |
| Cow position: | chr11:41170172-41169684 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 207 |
| Conread position: | 152-637 |
| Cow position: | chr11:4063338-4062854 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 152-656 |
| Cow position: | chr11:45922083-45921570 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 153-337 |
| Cow position: | chr11:10091203-10091398 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 153-354 |
| Cow position: | chr11:36743655-36743441 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 153-356 |
| Cow position: | chr11:73477833-73478048 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 153-430 |
| Cow position: | chr11:21902570-21902291 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 153-441 |
| Cow position: | chr11:64081558-64081259 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 153-471 |
| Cow position: | chr11:5342397-5342067 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 15, 204 |
| Conread position: | 153-564 |
| Cow position: | chr11:28054085-28053672 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 153-611 |
| Cow position: | chr11:4056953-4056505 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 151 |
| Conread position: | 153-611 |
| Cow position: | chr11:19063548-19063080 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 153-611 |
| Cow position: | chr11:28108661-28109130 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 153-611 |
| Cow position: | chr11:32452350-32452820 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 206 |
| Conread position: | 153-611 |
| Cow position: | chr11:61400540-61400086 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 154-635 |
| Cow position: | chr11:49840381-49840871 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 329 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 15, 123 |
| Conread position: | 155-317 |
| Cow position: | chr11:30252724-30252893 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 155-402 |
| Cow position: | chr11:33194032-33193777 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 201 |
| Conread position: | 155-431 |
| Cow position: | chr11:15984152-15984445 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 209 |
| Conread position: | 155-611 |
| Cow position: | chr11:17107159-17106690 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 222 |
| Conread position: | 155-611 |
| Cow position: | chr11:17546689-17547155 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 201 |
| Conread position: | 155-611 |
| Cow position: | chr11:20733715-20733246 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 221 |
| Conread position: | 155-611 |
| Cow position: | chr11:44518340-44517872 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 201 |
| Conread position: | 155-611 |
| Cow position: | chr11:52419917-52420396 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 155-611 |
| Cow position: | chr11:57627532-57627060 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 225 |
| Conread position: | 155-611 |
| Cow position: | chr11:63654810-63654342 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 155-611 |
| Cow position: | chr11:67451021-67451486 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 158-609 |
| Cow position: | chr11:18887386-18887841 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 158-611 |
| Cow position: | chr11:3493524-3493981 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 158-611 |
| Cow position: | chr11:28229226-28228773 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 158-626 |
| Cow position: | chr11:31861430-31861908 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 165-527 |
| Cow position: | chr11:53681951-53682328 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 166-611 |
| Cow position: | chr11:9156619-9156154 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 210 |
| Conread position: | 166-611 |
| Cow position: | chr11:9734140-9733685 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 166-611 |
| Cow position: | chr11:67846030-67845578 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 191 |
| Conread position: | 166-614 |
| Cow position: | chr11:37476462-37475987 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 393 |
| Conread position: | 166-618 |
| Cow position: | chr11:9601794-9601322 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 353 |
| Conread position: | 168-638 |
| Cow position: | chr11:50016457-50015984 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 171-437 |
| Cow position: | chr11:9216538-9216266 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 176-445 |
| Cow position: | chr11:18070640-18070376 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 145, 168 |
| Conread position: | 179-460 |
| Cow position: | chr11:21930460-21930179 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 184-620 |
| Cow position: | chr11:53286603-53286166 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 112 |
| Conread position: | 185-431 |
| Cow position: | chr11:1495526-1495277 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 134, 162 |
| Conread position: | 185-436 |
| Cow position: | chr11:21443843-21444089 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 185-452 |
| Cow position: | chr11:84390107-84390372 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 94 |
| Conread position: | 185-619 |
| Cow position: | chr11:40775449-40774999 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 194 |
| Conread position: | 185-635 |
| Cow position: | chr11:38834873-38834418 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 169 |
| Conread position: | 185-659 |
| Cow position: | chr11:31755390-31754923 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 71 |
| Conread position: | 186-525 |
| Cow position: | chr11:7117013-7117357 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 137, 208 |
| Conread position: | 186-585 |
| Cow position: | chr11:36763313-36763706 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 187-620 |
| Cow position: | chr11:75554415-75553998 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 190-528 |
| Cow position: | chr11:23127330-23126994 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 130, 154 |
| Conread position: | 191-611 |
| Cow position: | chr11:4034781-4034354 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 193-454 |
| Cow position: | chr11:22935664-22935926 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 161 |
| Conread position: | 195-472 |
| Cow position: | chr11:21474828-21475102 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 141, 59 |
| Conread position: | 195-611 |
| Cow position: | chr11:49559097-49558685 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 126, 18 |
| Conread position: | 196-613 |
| Cow position: | chr11:66438551-66438139 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 91 |
| Conread position: | 197-658 |
| Cow position: | chr11:26564511-26564057 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 310 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 198-613 |
| Cow position: | chr11:42522871-42522473 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 58 |
| Conread position: | 202-617 |
| Cow position: | chr11:72310455-72310035 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 165 |
| Conread position: | 207-620 |
| Cow position: | chr11:15898406-15897989 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 212-636 |
| Cow position: | chr11:15943757-15943326 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 238-611 |
| Cow position: | chr11:49553560-49553182 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 205 |
| Conread position: | 239-638 |
| Cow position: | chr11:74424203-74424612 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 255-633 |
| Cow position: | chr11:37357920-37358310 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 62, 98 |
| Conread position: | 258-623 |
| Cow position: | chr11:39804374-39804735 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 258-658 |
| Cow position: | chr11:42311807-42311402 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 260-616 |
| Cow position: | chr11:14728398-14728054 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 174, 47 |
| Conread position: | 277-613 |
| Cow position: | chr11:10869330-10869657 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 131 |
| Conread position: | 287-611 |
| Cow position: | chr11:29613328-29613001 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 293-608 |
| Cow position: | chr11:81852039-81851726 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 320-613 |
| Cow position: | chr11:4026904-4026616 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 323-611 |
| Cow position: | chr11:30252937-30253226 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 325-611 |
| Cow position: | chr11:66729802-66730081 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 325-619 |
| Cow position: | chr11:23880736-23881030 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 34 |
| Conread position: | 334-562 |
| Cow position: | chr11:31873906-31873683 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 344-608 |
| Cow position: | chr11:20505953-20506218 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 344-608 |
| Cow position: | chr11:20511329-20511594 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 345-611 |
| Cow position: | chr11:73134015-73134282 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 346-638 |
| Cow position: | chr11:76373263-76372979 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 134 |
| Conread position: | 362-619 |
| Cow position: | chr11:87142323-87142579 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 378-527 |
| Cow position: | chr11:27657061-27657213 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 405-594 |
| Cow position: | chr11:44490830-44490647 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 420-613 |
| Cow position: | chr11:21899044-21898850 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 120 |
| Conread position: | 421-618 |
| Cow position: | chr11:28391769-28391967 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 71 |
Show alignments to all cow chromosomes.