Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032H19.3
        

               Conread position:
               1-98
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-98
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-98
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 161
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               134-452
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               139-486
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               139-503
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               139-613
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               139-631
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               146-611
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               152-401
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               152-557
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               152-584
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 182
               

               Conread position:
               152-618
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 225
               

               Conread position:
               153-453
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 411
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-613
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 390
               

               Conread position:
               153-637
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 207
               

               Conread position:
               154-638
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               331
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               11, 120
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               158-468
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               158-620
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               337
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               10, 216
               

               Conread position:
               166-622
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               179-611
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 168
               

               Conread position:
               185-468
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               185-489
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 168
               

               Conread position:
               185-557
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 51
               

               Conread position:
               185-608
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               136, 61
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               185-613
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 177
               

               Conread position:
               185-613
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 169
               

               Conread position:
               185-655
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 169
               

               Conread position:
               190-442
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               191-356
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               107, 91
               

               Conread position:
               193-525
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               198-611
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 18
               

               Conread position:
               201-678
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               96, 48
               

               Conread position:
               233-622
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 138
               

               Conread position:
               238-438
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               93, 125
               

               Conread position:
               238-635
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               250-620
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               74, 103
               

               Conread position:
               263-618
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               269-613
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               90, 100
               

               Conread position:
               272-574
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               321-611
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               325-656
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               339-613
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               351-658
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               363-628
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               71, 163
               

               Conread position:
               367-605
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               379-610
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               386-619
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               417-611
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 116
               

               Conread position:
               420-611
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               28, 113
               
Show alignments to all cow chromosomes.