Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032H19.3
        

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               54, 198
               

               Conread position:
               2-116
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-139
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 160
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 172
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 160
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 164
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               134-448
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               138-611
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               138-611
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 222
               

               Conread position:
               139-619
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               142-620
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               328
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 113
               

               Conread position:
               144-451
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               148-459
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               151-616
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               152-315
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               152-319
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               152-558
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-585
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 203
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 207
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 399
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 205
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 398
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 96
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 209
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 163
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 206
               

               Conread position:
               152-634
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-638
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               153-313
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               153-352
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               153-442
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-470
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-503
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 230
               

               Conread position:
               153-564
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               153-570
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-619
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 154
               

               Conread position:
               154-620
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 406
               

               Conread position:
               155-318
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               155-319
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               155-610
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 201
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 226
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 223
               

               Conread position:
               156-619
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               158-611
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 135
               

               Conread position:
               160-608
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               165-611
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 66
               

               Conread position:
               165-611
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 217
               

               Conread position:
               166-596
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 200
               

               Conread position:
               166-611
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 188
               

               Conread position:
               166-627
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 208
               

               Conread position:
               167-491
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 128
               

               Conread position:
               167-611
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               167-619
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 259
               

               Conread position:
               168-611
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               290
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               171-353
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 179
               

               Conread position:
               171-528
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               184-619
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               135, 14
               

               Conread position:
               185-387
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               134, 37
               

               Conread position:
               185-486
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               131, 93
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 18
               

               Conread position:
               185-638
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 169
               

               Conread position:
               185-670
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 188
               

               Conread position:
               196-657
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 39
               

               Conread position:
               199-315
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               205-638
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 144
               

               Conread position:
               228-613
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 127
               

               Conread position:
               229-619
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 125
               

               Conread position:
               254-611
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               66, 123
               

               Conread position:
               259-436
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 8
               

               Conread position:
               260-611
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               339-611
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               362-619
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               139, 92
               

               Conread position:
               366-619
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               404-613
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 104
               

               Conread position:
               417-611
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               421-611
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 121
               
Show alignments to all cow chromosomes.