Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-117
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-149
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-151
Cow position:
Alignm length: 160
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 62

Conread position: 1-159
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 156

Conread position: 1-186
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 166

Conread position: 1-206
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 160

Conread position: 2-117
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 9

Conread position: 2-139
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-208
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 175

Conread position: 4-149
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 95-619
Cow position:
Alignm length: 540
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 62

Conread position: 110-520
Cow position:
Alignm length: 440
Alignm identity: 280
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 43

Conread position: 111-618
Cow position:
Alignm length: 522
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 126-619
Cow position:
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 133-610
Cow position:
Alignm length: 492
Alignm identity: 332
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 21

Conread position: 139-365
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 13

Conread position: 139-494
Cow position:
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 13

Conread position: 139-613
Cow position:
Alignm length: 493
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 146-611
Cow position:
Alignm length: 483
Alignm identity: 317
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 214

Conread position: 146-638
Cow position:
Alignm length: 511
Alignm identity: 333
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 132

Conread position: 152-286
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 152-319
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 16

Conread position: 152-400
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 222

Conread position: 152-401
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 69

Conread position: 152-441
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 208

Conread position: 152-442
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 17, 130

Conread position: 152-486
Cow position:
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 62

Conread position: 152-559
Cow position:
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-573
Cow position:
Alignm length: 443
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 205

Conread position: 152-579
Cow position:
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-605
Cow position:
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-611
Cow position:
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 396

Conread position: 152-611
Cow position:
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 83

Conread position: 152-611
Cow position:
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 141

Conread position: 152-613
Cow position:
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 220

Conread position: 152-618
Cow position:
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 391

Conread position: 152-618
Cow position:
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 392

Conread position: 152-618
Cow position:
Alignm length: 485
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 97

Conread position: 152-619
Cow position:
Alignm length: 492
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 152-619
Cow position:
Alignm length: 486
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-619
Cow position:
Alignm length: 479
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 118

Conread position: 152-619
Cow position:
Alignm length: 485
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 392

Conread position: 152-626
Cow position:
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 294

Conread position: 152-631
Cow position:
Alignm length: 501
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 224

Conread position: 152-638
Cow position:
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 60

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 154-398
Cow position:
Alignm length: 252
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 60

Conread position: 154-613
Cow position:
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 206

Conread position: 155-315
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 155-585
Cow position:
Alignm length: 450
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 138

Conread position: 155-611
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 222

Conread position: 155-611
Cow position:
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 200

Conread position: 155-611
Cow position:
Alignm length: 472
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 202

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 158-611
Cow position:
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 201

Conread position: 158-611
Cow position:
Alignm length: 472
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 201

Conread position: 158-613
Cow position:
Alignm length: 476
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 158-613
Cow position:
Alignm length: 465
Alignm identity: 311
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 125

Conread position: 166-472
Cow position:
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 254

Conread position: 166-593
Cow position:
Alignm length: 448
Alignm identity: 285
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 109

Conread position: 166-611
Cow position:
Alignm length: 464
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 205

Conread position: 166-613
Cow position:
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 18

Conread position: 167-394
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 56

Conread position: 181-319
Cow position:
Alignm length: 139
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 181-485
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 138, 166

Conread position: 184-592
Cow position:
Alignm length: 413
Alignm identity: 268
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 25

Conread position: 185-319
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 185-353
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 10

Conread position: 185-354
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 152

Conread position: 185-354
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 152

Conread position: 185-486
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 169

Conread position: 185-494
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 134, 64

Conread position: 185-574
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 112

Conread position: 185-611
Cow position:
Alignm length: 442
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 184

Conread position: 185-612
Cow position:
Alignm length: 433
Alignm identity: 291
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 137, 16

Conread position: 185-613
Cow position:
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 168

Conread position: 185-613
Cow position:
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 16

Conread position: 185-618
Cow position:
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 21

Conread position: 185-619
Cow position:
Alignm length: 447
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 185-619
Cow position:
Alignm length: 456
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 185-619
Cow position:
Alignm length: 449
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 185-620
Cow position:
Alignm length: 448
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 163

Conread position: 185-632
Cow position:
Alignm length: 473
Alignm identity: 312
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 113

Conread position: 185-637
Cow position:
Alignm length: 466
Alignm identity: 304
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 134, 85

Conread position: 185-638
Cow position:
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 365

Conread position: 186-613
Cow position:
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 219

Conread position: 186-613
Cow position:
Alignm length: 438
Alignm identity: 288
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 8

Conread position: 186-618
Cow position:
Alignm length: 444
Alignm identity: 297
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 131, 86

Conread position: 190-528
Cow position:
Alignm length: 363
Alignm identity: 242
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 168

Conread position: 191-437
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 49

Conread position: 191-530
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 130

Conread position: 192-529
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 125, 62

Conread position: 192-611
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 37

Conread position: 198-475
Cow position:
Alignm length: 281
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 53

Conread position: 198-611
Cow position:
Alignm length: 427
Alignm identity: 280
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 149

Conread position: 209-631
Cow position:
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 90

Conread position: 215-433
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 138

Conread position: 229-503
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 9

Conread position: 233-619
Cow position:
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 277

Conread position: 238-529
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 20

Conread position: 244-659
Cow position:
Alignm length: 437
Alignm identity: 284
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 5, 49

Conread position: 255-609
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 66, 97

Conread position: 267-611
Cow position:
Alignm length: 352
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 267-613
Cow position:
Alignm length: 359
Alignm identity: 235
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 30

Conread position: 293-638
Cow position:
Alignm length: 352
Alignm identity: 238
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 59

Conread position: 296-571
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 56

Conread position: 297-619
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 5

Conread position: 323-611
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 10

Conread position: 346-611
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 84, 27

Conread position: 397-626
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 7

Conread position: 403-618
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 149

Conread position: 404-636
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 13

Conread position: 415-602
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 119

Conread position: 417-619
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 117

Conread position: 419-626
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 37

Show alignments to all cow chromosomes.