Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-149
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1-151
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 105

Conread position: 1-151
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-157
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 164

Conread position: 1-159
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 73

Conread position: 1-159
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 2-98
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-117
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 2-117
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-151
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-151
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-208
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 164

Conread position: 3-151
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 3-151
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 8-151
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 56

Conread position: 102-390
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 24

Conread position: 102-611
Cow position:
Alignm length: 530
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 54

Conread position: 125-611
Cow position:
Alignm length: 515
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 133-611
Cow position:
Alignm length: 495
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 139-354
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 17

Conread position: 139-601
Cow position:
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 139-619
Cow position:
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 151-610
Cow position:
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 209

Conread position: 152-288
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 152-369
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 204

Conread position: 152-376
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 152-391
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 14, 60

Conread position: 152-442
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 205

Conread position: 152-520
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 209

Conread position: 152-529
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 317

Conread position: 152-611
Cow position:
Alignm length: 474
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 222

Conread position: 152-611
Cow position:
Alignm length: 492
Alignm identity: 330
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 38

Conread position: 152-613
Cow position:
Alignm length: 480
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 221

Conread position: 152-613
Cow position:
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position:
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 53

Conread position: 152-613
Cow position:
Alignm length: 481
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 152-613
Cow position:
Alignm length: 480
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 120

Conread position: 152-613
Cow position:
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position:
Alignm length: 477
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 152-617
Cow position:
Alignm length: 484
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 221

Conread position: 152-618
Cow position:
Alignm length: 485
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-618
Cow position:
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 57

Conread position: 152-619
Cow position:
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-619
Cow position:
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 149

Conread position: 152-620
Cow position:
Alignm length: 481
Alignm identity: 318
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 12

Conread position: 152-620
Cow position:
Alignm length: 488
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 131

Conread position: 152-634
Cow position:
Alignm length: 501
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 120

Conread position: 152-659
Cow position:
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 215

Conread position: 153-326
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 153-356
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 74

Conread position: 153-364
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 15, 202

Conread position: 153-568
Cow position:
Alignm length: 430
Alignm identity: 280
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 140

Conread position: 153-611
Cow position:
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 401

Conread position: 153-613
Cow position:
Alignm length: 474
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 329

Conread position: 153-618
Cow position:
Alignm length: 480
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 154-613
Cow position:
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 219

Conread position: 155-318
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 228

Conread position: 155-611
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 389

Conread position: 155-678
Cow position:
Alignm length: 552
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 232

Conread position: 165-611
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 195

Conread position: 167-619
Cow position:
Alignm length: 478
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 169-486
Cow position:
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 185

Conread position: 171-613
Cow position:
Alignm length: 458
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 42

Conread position: 180-637
Cow position:
Alignm length: 465
Alignm identity: 288
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 147, 169

Conread position: 185-319
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 185-437
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 136, 104

Conread position: 185-608
Cow position:
Alignm length: 431
Alignm identity: 281
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 103

Conread position: 185-611
Cow position:
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 169

Conread position: 185-611
Cow position:
Alignm length: 434
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 148

Conread position: 185-611
Cow position:
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 35

Conread position: 185-613
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 44

Conread position: 185-613
Cow position:
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 170

Conread position: 185-616
Cow position:
Alignm length: 442
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 170

Conread position: 185-616
Cow position:
Alignm length: 447
Alignm identity: 297
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 164

Conread position: 185-618
Cow position:
Alignm length: 446
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 183

Conread position: 185-637
Cow position:
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 26

Conread position: 185-638
Cow position:
Alignm length: 467
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 184

Conread position: 185-671
Cow position:
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 141

Conread position: 186-611
Cow position:
Alignm length: 445
Alignm identity: 305
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 109, 9

Conread position: 186-657
Cow position:
Alignm length: 482
Alignm identity: 309
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 58

Conread position: 187-610
Cow position:
Alignm length: 433
Alignm identity: 269
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 79

Conread position: 187-619
Cow position:
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 165

Conread position: 190-485
Cow position:
Alignm length: 310
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 190-605
Cow position:
Alignm length: 425
Alignm identity: 294
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 134, 170

Conread position: 190-611
Cow position:
Alignm length: 432
Alignm identity: 280
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 128, 87

Conread position: 191-619
Cow position:
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 162

Conread position: 191-626
Cow position:
Alignm length: 445
Alignm identity: 294
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 129, 160

Conread position: 193-611
Cow position:
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 195-529
Cow position:
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 205

Conread position: 205-611
Cow position:
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 145

Conread position: 206-632
Cow position:
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 148

Conread position: 207-611
Cow position:
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 28

Conread position: 211-619
Cow position:
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 142

Conread position: 247-450
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 66, 116

Conread position: 247-527
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 107

Conread position: 252-638
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 102

Conread position: 323-607
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 150

Conread position: 323-611
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 10

Conread position: 325-658
Cow position:
Alignm length: 336
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 126, 24

Conread position: 326-611
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 110, 17

Conread position: 331-619
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 67, 17

Conread position: 332-613
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 169, 6

Conread position: 346-611
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 31

Conread position: 350-611
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 16

Conread position: 352-610
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 29

Conread position: 366-611
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 143, 78

Conread position: 368-623
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 17

Conread position: 386-619
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 48

Conread position: 405-670
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 28, 134

Conread position: 408-619
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 132

Conread position: 426-613
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 118

Conread position: 429-636
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 109

Conread position: 453-608
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 18

Show alignments to all cow chromosomes.