Cow genome map
Conread name: | Ss1.1-Pig4-TMW8032H19.3 |
Conread position: | 1-115 |
Cow position: | chr18:8169256-8169371 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-151 |
Cow position: | chr18:11274558-11274395 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-151 |
Cow position: | chr18:22603033-22603196 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-151 |
Cow position: | chr18:51342234-51342397 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-151 |
Cow position: | chr18:51462532-51462372 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-157 |
Cow position: | chr18:24040177-24040009 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 55, 164 |
Conread position: | 1-159 |
Cow position: | chr18:33269378-33269547 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-159 |
Cow position: | chr18:51660895-51661064 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 55, 26 |
Conread position: | 1-206 |
Cow position: | chr18:19352919-19353136 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 55, 176 |
Conread position: | 1-208 |
Cow position: | chr18:33336419-33336639 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 55, 169 |
Conread position: | 2-137 |
Cow position: | chr18:54004065-54004197 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 54, 101 |
Conread position: | 2-139 |
Cow position: | chr18:16176061-16175917 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 54, 27 |
Conread position: | 2-149 |
Cow position: | chr18:14130946-14131102 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 121 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 2-149 |
Cow position: | chr18:14416533-14416694 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 2-149 |
Cow position: | chr18:16088701-16088856 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 2-149 |
Cow position: | chr18:40478938-40479098 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 2-149 |
Cow position: | chr18:52651473-52651626 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 81 |
Conread position: | 2-196 |
Cow position: | chr18:27837761-27837558 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 148 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 54, 173 |
Conread position: | 3-150 |
Cow position: | chr18:54170982-54170820 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 6-149 |
Cow position: | chr18:28973330-28973174 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 97-619 |
Cow position: | chr18:37506810-37507340 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 30 |
Conread position: | 108-319 |
Cow position: | chr18:25351618-25351835 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 108-475 |
Cow position: | chr18:32653079-32653457 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 133-613 |
Cow position: | chr18:19405675-19405198 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 326 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 33, 156 |
Conread position: | 149-618 |
Cow position: | chr18:14131296-14131776 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 211 |
Conread position: | 149-637 |
Cow position: | chr18:51481790-51482271 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 66 |
Conread position: | 152-343 |
Cow position: | chr18:33750919-33751118 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 36, 15 |
Conread position: | 152-431 |
Cow position: | chr18:15856151-15856434 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 21, 141 |
Conread position: | 152-522 |
Cow position: | chr18:36509245-36509628 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 211 |
Conread position: | 152-611 |
Cow position: | chr18:14416891-14417353 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 152-611 |
Cow position: | chr18:16089047-16089495 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 108 |
Conread position: | 152-611 |
Cow position: | chr18:19353265-19353739 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 152 |
Conread position: | 152-612 |
Cow position: | chr18:54005265-54004797 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 205 |
Conread position: | 152-613 |
Cow position: | chr18:27837404-27836932 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 152-616 |
Cow position: | chr18:16175710-16175238 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 152-618 |
Cow position: | chr18:40479295-40479776 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 79 |
Conread position: | 152-619 |
Cow position: | chr18:23798555-23799030 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 152-619 |
Cow position: | chr18:28972978-28972504 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 152-619 |
Cow position: | chr18:52651818-52652293 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 207 |
Conread position: | 152-619 |
Cow position: | chr18:54170629-54170127 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 63 |
Conread position: | 152-632 |
Cow position: | chr18:16869333-16869799 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 106 |
Conread position: | 152-670 |
Cow position: | chr18:41839902-41839391 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 196 |
Conread position: | 153-354 |
Cow position: | chr18:4946963-4947171 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 158 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 13, 69 |
Conread position: | 153-611 |
Cow position: | chr18:11274199-11273742 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 140 |
Conread position: | 153-611 |
Cow position: | chr18:54023227-54022755 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 220 |
Conread position: | 154-430 |
Cow position: | chr18:33952672-33952389 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 207 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 14, 200 |
Conread position: | 155-316 |
Cow position: | chr18:51462180-51462013 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 155-611 |
Cow position: | chr18:51661250-51661716 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 203 |
Conread position: | 155-620 |
Cow position: | chr18:16079576-16080055 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 235 |
Conread position: | 162-619 |
Cow position: | chr18:29237826-29238279 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 51 |
Conread position: | 166-355 |
Cow position: | chr18:26245379-26245574 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 146 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 42, 134 |
Conread position: | 166-527 |
Cow position: | chr18:2475242-2474887 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 237 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 193, 49 |
Conread position: | 166-601 |
Cow position: | chr18:33142175-33142618 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 294 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 23, 105 |
Conread position: | 166-611 |
Cow position: | chr18:51342606-51343061 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 188 |
Conread position: | 169-611 |
Cow position: | chr18:25364129-25364569 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 303 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 20, 183 |
Conread position: | 185-353 |
Cow position: | chr18:33269766-33269939 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 141 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 185-389 |
Cow position: | chr18:32768603-32768808 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 126, 106 |
Conread position: | 185-499 |
Cow position: | chr18:51239234-51239550 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 215 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 132, 29 |
Conread position: | 185-528 |
Cow position: | chr18:51275099-51274755 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 236 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 136, 166 |
Conread position: | 185-611 |
Cow position: | chr18:36255963-36255549 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 294 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 40, 145 |
Conread position: | 185-613 |
Cow position: | chr18:27988136-27988561 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 279 |
Conread position: | 185-620 |
Cow position: | chr18:54271441-54271864 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 40 |
Conread position: | 189-613 |
Cow position: | chr18:15821865-15821459 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 276 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 179, 12 |
Conread position: | 190-527 |
Cow position: | chr18:29073945-29074279 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 227 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 92, 76 |
Conread position: | 195-606 |
Cow position: | chr18:30848716-30848302 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 266 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 124, 152 |
Conread position: | 195-608 |
Cow position: | chr18:40081453-40081040 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 266 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 102, 39 |
Conread position: | 205-410 |
Cow position: | chr18:45946882-45946675 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 114, 144 |
Conread position: | 214-638 |
Cow position: | chr18:47742477-47742904 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 44 |
Conread position: | 233-613 |
Cow position: | chr18:56013569-56013963 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 272 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 87, 14 |
Conread position: | 261-437 |
Cow position: | chr18:34042478-34042654 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 261-453 |
Cow position: | chr18:33337231-33337416 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 107, 64 |
Conread position: | 302-611 |
Cow position: | chr18:51461991-51461677 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 224 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 18, 65 |
Conread position: | 326-634 |
Cow position: | chr18:25352347-25352655 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 223 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 107, 23 |
Conread position: | 332-588 |
Cow position: | chr18:33751360-33751606 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 183 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 27, 44 |
Conread position: | 349-622 |
Cow position: | chr18:33270062-33270324 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 192 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 82, 19 |
Conread position: | 362-638 |
Cow position: | chr18:29865485-29865209 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 197 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 71, 34 |
Conread position: | 402-638 |
Cow position: | chr18:37663509-37663742 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 31, 131 |
Show alignments to all cow chromosomes.