Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-115
Cow position: chr18:8169256-8169371 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position: chr18:11274558-11274395 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position: chr18:22603033-22603196 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position: chr18:51342234-51342397 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position: chr18:51462532-51462372 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-157
Cow position: chr18:24040177-24040009 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 164

Conread position: 1-159
Cow position: chr18:33269378-33269547 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-159
Cow position: chr18:51660895-51661064 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 26

Conread position: 1-206
Cow position: chr18:19352919-19353136 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 176

Conread position: 1-208
Cow position: chr18:33336419-33336639 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 169

Conread position: 2-137
Cow position: chr18:54004065-54004197 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 101

Conread position: 2-139
Cow position: chr18:16176061-16175917 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 27

Conread position: 2-149
Cow position: chr18:14130946-14131102 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr18:14416533-14416694 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 2-149
Cow position: chr18:16088701-16088856 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr18:40478938-40479098 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 2-149
Cow position: chr18:52651473-52651626 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 81

Conread position: 2-196
Cow position: chr18:27837761-27837558 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 173

Conread position: 3-150
Cow position: chr18:54170982-54170820 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 6-149
Cow position: chr18:28973330-28973174 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 97-619
Cow position: chr18:37506810-37507340 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 30

Conread position: 108-319
Cow position: chr18:25351618-25351835 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 17

Conread position: 108-475
Cow position: chr18:32653079-32653457 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 17

Conread position: 133-613
Cow position: chr18:19405675-19405198 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 326
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 33, 156

Conread position: 149-618
Cow position: chr18:14131296-14131776 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 211

Conread position: 149-637
Cow position: chr18:51481790-51482271 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 66

Conread position: 152-343
Cow position: chr18:33750919-33751118 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 15

Conread position: 152-431
Cow position: chr18:15856151-15856434 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 141

Conread position: 152-522
Cow position: chr18:36509245-36509628 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 211

Conread position: 152-611
Cow position: chr18:14416891-14417353 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-611
Cow position: chr18:16089047-16089495 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 108

Conread position: 152-611
Cow position: chr18:19353265-19353739 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 152

Conread position: 152-612
Cow position: chr18:54005265-54004797 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 205

Conread position: 152-613
Cow position: chr18:27837404-27836932 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-616
Cow position: chr18:16175710-16175238 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-618
Cow position: chr18:40479295-40479776 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 79

Conread position: 152-619
Cow position: chr18:23798555-23799030 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-619
Cow position: chr18:28972978-28972504 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-619
Cow position: chr18:52651818-52652293 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 152-619
Cow position: chr18:54170629-54170127 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 63

Conread position: 152-632
Cow position: chr18:16869333-16869799 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 106

Conread position: 152-670
Cow position: chr18:41839902-41839391 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 196

Conread position: 153-354
Cow position: chr18:4946963-4947171 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 13, 69

Conread position: 153-611
Cow position: chr18:11274199-11273742 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 140

Conread position: 153-611
Cow position: chr18:54023227-54022755 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 220

Conread position: 154-430
Cow position: chr18:33952672-33952389 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 200

Conread position: 155-316
Cow position: chr18:51462180-51462013 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 155-611
Cow position: chr18:51661250-51661716 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 203

Conread position: 155-620
Cow position: chr18:16079576-16080055 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 235

Conread position: 162-619
Cow position: chr18:29237826-29238279 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 51

Conread position: 166-355
Cow position: chr18:26245379-26245574 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 134

Conread position: 166-527
Cow position: chr18:2475242-2474887 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 193, 49

Conread position: 166-601
Cow position: chr18:33142175-33142618 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 294
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 105

Conread position: 166-611
Cow position: chr18:51342606-51343061 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 169-611
Cow position: chr18:25364129-25364569 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 303
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 183

Conread position: 185-353
Cow position: chr18:33269766-33269939 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 134, 0

Conread position: 185-389
Cow position: chr18:32768603-32768808 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 126, 106

Conread position: 185-499
Cow position: chr18:51239234-51239550 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 29

Conread position: 185-528
Cow position: chr18:51275099-51274755 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 136, 166

Conread position: 185-611
Cow position: chr18:36255963-36255549 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 294
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 40, 145

Conread position: 185-613
Cow position: chr18:27988136-27988561 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 279

Conread position: 185-620
Cow position: chr18:54271441-54271864 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 40

Conread position: 189-613
Cow position: chr18:15821865-15821459 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 276
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 179, 12

Conread position: 190-527
Cow position: chr18:29073945-29074279 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 76

Conread position: 195-606
Cow position: chr18:30848716-30848302 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 266
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 152

Conread position: 195-608
Cow position: chr18:40081453-40081040 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 266
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 39

Conread position: 205-410
Cow position: chr18:45946882-45946675 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 114, 144

Conread position: 214-638
Cow position: chr18:47742477-47742904 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 44

Conread position: 233-613
Cow position: chr18:56013569-56013963 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 87, 14

Conread position: 261-437
Cow position: chr18:34042478-34042654 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 25

Conread position: 261-453
Cow position: chr18:33337231-33337416 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 64

Conread position: 302-611
Cow position: chr18:51461991-51461677 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 65

Conread position: 326-634
Cow position: chr18:25352347-25352655 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 107, 23

Conread position: 332-588
Cow position: chr18:33751360-33751606 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 44

Conread position: 349-622
Cow position: chr18:33270062-33270324 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 82, 19

Conread position: 362-638
Cow position: chr18:29865485-29865209 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 34

Conread position: 402-638
Cow position: chr18:37663509-37663742 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 131

Show alignments to all cow chromosomes.