Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032H19.3
        

               Conread position:
               1-98
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 165
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 201
               

               Conread position:
               2-139
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               4-151
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               97-611
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 30
               

               Conread position:
               133-407
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               135-602
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               138-619
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               143-616
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 95
               

               Conread position:
               152-475
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 224
               

               Conread position:
               152-560
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 213
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 204
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 403
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 207
               

               Conread position:
               152-616
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               329
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 140
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 132
               

               Conread position:
               152-620
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 250
               

               Conread position:
               152-634
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 411
               

               Conread position:
               154-355
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               154-611
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 204
               

               Conread position:
               154-613
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 205
               

               Conread position:
               155-353
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 200
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 200
               

               Conread position:
               155-619
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 205
               

               Conread position:
               161-602
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               166-608
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               166-610
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 188
               

               Conread position:
               166-611
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 210
               

               Conread position:
               166-638
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 188
               

               Conread position:
               171-343
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               173-612
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 220
               

               Conread position:
               184-611
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               289
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               184-624
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               135, 11
               

               Conread position:
               185-486
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 182
               

               Conread position:
               185-527
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 160
               

               Conread position:
               185-612
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 166
               

               Conread position:
               185-618
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 24
               

               Conread position:
               185-618
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 169
               

               Conread position:
               185-634
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 373
               

               Conread position:
               190-314
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               190-422
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               190-619
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               126, 13
               

               Conread position:
               196-614
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               198-619
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               279
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               121, 94
               

               Conread position:
               204-544
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 172
               

               Conread position:
               208-523
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               112, 155
               

               Conread position:
               215-613
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               104, 132
               

               Conread position:
               224-612
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               95, 129
               

               Conread position:
               232-570
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               234-613
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 119
               

               Conread position:
               252-638
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               54, 135
               

               Conread position:
               267-613
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               155, 61
               

               Conread position:
               271-529
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               49, 81
               

               Conread position:
               287-613
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 256
               

               Conread position:
               296-613
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               26, 66
               

               Conread position:
               324-611
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               111, 23
               

               Conread position:
               325-619
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 211
               

               Conread position:
               348-611
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               351-578
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               362-620
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               378-613
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 157
               
Show alignments to all cow chromosomes.