Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032H19.3
        

               Conread position:
               1-92
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 136
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 181
               

               Conread position:
               2-117
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 175
               

               Conread position:
               4-154
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               102-658
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 263
               

               Conread position:
               143-439
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 138
               

               Conread position:
               152-285
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 118
               

               Conread position:
               152-400
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 207
               

               Conread position:
               152-476
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               152-494
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 308
               

               Conread position:
               152-529
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               152-574
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               304
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               152-610
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 206
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               152-618
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 206
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 208
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 209
               

               Conread position:
               152-620
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               152-634
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 207
               

               Conread position:
               153-486
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-575
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               153-619
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 279
               

               Conread position:
               155-401
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 198
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 200
               

               Conread position:
               158-411
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 209
               

               Conread position:
               166-611
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 189
               

               Conread position:
               173-544
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               303, 16
               

               Conread position:
               173-620
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               179-616
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 273
               

               Conread position:
               185-319
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               185-607
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 37
               

               Conread position:
               185-607
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 88
               

               Conread position:
               185-618
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 153
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 27
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 76
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 169
               

               Conread position:
               185-637
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 168
               

               Conread position:
               185-658
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               329
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               385, 51
               

               Conread position:
               185-671
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 183
               

               Conread position:
               186-491
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               107, 68
               

               Conread position:
               186-611
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               187-611
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 362
               

               Conread position:
               190-618
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               102, 110
               

               Conread position:
               198-671
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               113, 79
               

               Conread position:
               200-611
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               119, 58
               

               Conread position:
               245-613
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               271-619
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               272-619
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               278-611
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 25
               

               Conread position:
               325-619
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 24
               

               Conread position:
               334-618
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               334-619
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               175, 26
               

               Conread position:
               343-619
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               399-611
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               405-619
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               421-611
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 24
               
Show alignments to all cow chromosomes.