Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032H19.3
        

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 176
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-156
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 157
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 156
               

               Conread position:
               125-619
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               134-619
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               139-611
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               143-309
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               151-491
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               151-619
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 114
               

               Conread position:
               152-315
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               152-315
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               152-395
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               152-430
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               14, 183
               

               Conread position:
               152-475
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               152-485
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 199
               

               Conread position:
               152-587
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 207
               

               Conread position:
               152-592
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 320
               

               Conread position:
               152-608
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-609
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 329
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 228
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 206
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 379
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 209
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               153-326
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               153-367
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 119
               

               Conread position:
               153-468
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               153-494
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-528
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               137, 35
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               153-622
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 198
               

               Conread position:
               153-638
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 259
               

               Conread position:
               154-410
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 201
               

               Conread position:
               154-429
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               154-619
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 336
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               307
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               13, 137
               

               Conread position:
               158-611
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 196
               

               Conread position:
               166-611
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 220
               

               Conread position:
               166-611
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 210
               

               Conread position:
               177-638
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 177
               

               Conread position:
               179-608
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 175
               

               Conread position:
               181-571
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 168
               

               Conread position:
               185-432
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               132, 169
               

               Conread position:
               185-433
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               185-453
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               135, 105
               

               Conread position:
               185-589
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 155
               

               Conread position:
               185-593
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               134, 263
               

               Conread position:
               185-608
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               110, 97
               

               Conread position:
               185-610
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 380
               

               Conread position:
               185-613
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 106
               

               Conread position:
               185-613
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 361
               

               Conread position:
               185-613
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 24
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 109
               

               Conread position:
               185-631
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 120
               

               Conread position:
               185-658
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               248, 60
               

               Conread position:
               191-638
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 156
               

               Conread position:
               193-654
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 81
               

               Conread position:
               195-609
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               141, 169
               

               Conread position:
               196-611
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               202-619
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               276
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               139, 126
               

               Conread position:
               204-606
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               273
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               209-618
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 140
               

               Conread position:
               209-619
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 349
               

               Conread position:
               221-458
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               98, 128
               

               Conread position:
               224-611
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 125
               

               Conread position:
               226-611
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               102, 126
               

               Conread position:
               239-619
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 134
               

               Conread position:
               260-658
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               267-638
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               48, 209
               

               Conread position:
               269-611
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               275-634
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               280-582
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               303-611
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               366-585
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               135, 64
               
Show alignments to all cow chromosomes.