Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-139
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 123

Conread position: 1-150
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-152
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-159
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-159
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-181
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 55, 160

Conread position: 1-204
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 148

Conread position: 1-206
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 28

Conread position: 1-206
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 164

Conread position: 2-98
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 2-149
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-150
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 2-156
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 153

Conread position: 2-206
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 175

Conread position: 4-98
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 4-151
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 88-458
Cow position:
Alignm length: 385
Alignm identity: 249
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 60

Conread position: 112-620
Cow position:
Alignm length: 527
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 35

Conread position: 138-323
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 13

Conread position: 139-619
Cow position:
Alignm length: 495
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 10

Conread position: 145-613
Cow position:
Alignm length: 489
Alignm identity: 262
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 173, 227

Conread position: 151-618
Cow position:
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 297

Conread position: 152-472
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 86

Conread position: 152-486
Cow position:
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 225

Conread position: 152-530
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 128, 26

Conread position: 152-536
Cow position:
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 203

Conread position: 152-579
Cow position:
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 152-589
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 234

Conread position: 152-608
Cow position:
Alignm length: 485
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 130

Conread position: 152-610
Cow position:
Alignm length: 477
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position:
Alignm length: 492
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 405

Conread position: 152-613
Cow position:
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 62

Conread position: 152-618
Cow position:
Alignm length: 485
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 103

Conread position: 152-618
Cow position:
Alignm length: 488
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 152-619
Cow position:
Alignm length: 483
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 390

Conread position: 152-619
Cow position:
Alignm length: 485
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 209

Conread position: 152-619
Cow position:
Alignm length: 485
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 132

Conread position: 152-619
Cow position:
Alignm length: 486
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 209

Conread position: 152-634
Cow position:
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 226

Conread position: 152-634
Cow position:
Alignm length: 500
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 221

Conread position: 152-634
Cow position:
Alignm length: 498
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 205

Conread position: 152-638
Cow position:
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 53

Conread position: 153-318
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 153-385
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 202

Conread position: 153-431
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 202

Conread position: 153-611
Cow position:
Alignm length: 479
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 204

Conread position: 153-611
Cow position:
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 203

Conread position: 153-611
Cow position:
Alignm length: 494
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 149

Conread position: 154-342
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 102

Conread position: 154-571
Cow position:
Alignm length: 432
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 154-585
Cow position:
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 203

Conread position: 155-310
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 155-442
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 155-503
Cow position:
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 201

Conread position: 155-608
Cow position:
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 203

Conread position: 155-611
Cow position:
Alignm length: 482
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 229

Conread position: 155-611
Cow position:
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 202

Conread position: 155-611
Cow position:
Alignm length: 470
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 199

Conread position: 155-611
Cow position:
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 203

Conread position: 155-612
Cow position:
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 205

Conread position: 155-619
Cow position:
Alignm length: 485
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 334

Conread position: 162-319
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 109

Conread position: 165-546
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 157

Conread position: 166-611
Cow position:
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 163

Conread position: 166-611
Cow position:
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 115

Conread position: 166-611
Cow position:
Alignm length: 461
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 210

Conread position: 166-611
Cow position:
Alignm length: 469
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 110

Conread position: 166-613
Cow position:
Alignm length: 478
Alignm identity: 306
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 185

Conread position: 179-681
Cow position:
Alignm length: 551
Alignm identity: 367
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 143, 402

Conread position: 182-619
Cow position:
Alignm length: 444
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 154, 84

Conread position: 183-619
Cow position:
Alignm length: 449
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 164

Conread position: 185-447
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 162

Conread position: 185-595
Cow position:
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 165

Conread position: 185-611
Cow position:
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 168

Conread position: 185-618
Cow position:
Alignm length: 446
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 60

Conread position: 185-637
Cow position:
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 14

Conread position: 185-638
Cow position:
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 59

Conread position: 186-611
Cow position:
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 182

Conread position: 187-520
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 248, 107

Conread position: 190-437
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 149, 121

Conread position: 190-486
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 129, 154

Conread position: 190-613
Cow position:
Alignm length: 429
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 105

Conread position: 190-658
Cow position:
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 38

Conread position: 191-622
Cow position:
Alignm length: 447
Alignm identity: 289
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 59, 13

Conread position: 192-611
Cow position:
Alignm length: 436
Alignm identity: 289
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 126, 61

Conread position: 196-619
Cow position:
Alignm length: 438
Alignm identity: 284
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 139, 260

Conread position: 197-448
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 199-609
Cow position:
Alignm length: 421
Alignm identity: 273
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 132, 55

Conread position: 224-611
Cow position:
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 89

Conread position: 225-466
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 137, 64

Conread position: 229-620
Cow position:
Alignm length: 403
Alignm identity: 264
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 138

Conread position: 261-619
Cow position:
Alignm length: 373
Alignm identity: 249
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 92

Conread position: 266-611
Cow position:
Alignm length: 359
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 87

Conread position: 284-611
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 87

Conread position: 288-620
Cow position:
Alignm length: 339
Alignm identity: 219
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 9

Conread position: 291-611
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 63

Conread position: 294-669
Cow position:
Alignm length: 383
Alignm identity: 258
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 23, 140

Conread position: 303-611
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 18, 49

Conread position: 316-607
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 53

Conread position: 318-503
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 15

Conread position: 325-619
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 96, 14

Conread position: 366-611
Cow position:
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 166

Conread position: 395-611
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 144

Conread position: 403-611
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 53

Conread position: 408-638
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 126

Conread position: 456-618
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 84

Show alignments to all cow chromosomes.