Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032H19.3
        

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               97, 49
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 165
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               4-149
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               8-151
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               14-149
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               132-437
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               138-611
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               138-617
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 162
               

               Conread position:
               139-618
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               150-303
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               151-616
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 236
               

               Conread position:
               152-318
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               152-345
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               152-494
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 208
               

               Conread position:
               152-516
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 58
               

               Conread position:
               152-528
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 175
               

               Conread position:
               152-559
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               152-565
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 207
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 206
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 103
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 223
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 102
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-618
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 340
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-637
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 211
               

               Conread position:
               152-671
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               153-559
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 203
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 235
               

               Conread position:
               153-613
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               305
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               153-618
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 224
               

               Conread position:
               153-619
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 203
               

               Conread position:
               154-611
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 227
               

               Conread position:
               154-620
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               154-671
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 211
               

               Conread position:
               155-318
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 203
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 156
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 224
               

               Conread position:
               155-635
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               159-355
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 196
               

               Conread position:
               165-529
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 124
               

               Conread position:
               167-353
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               167-380
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 192
               

               Conread position:
               170-619
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               173-428
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               178-611
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 366
               

               Conread position:
               185-306
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               185-393
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               185-471
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               139, 103
               

               Conread position:
               185-516
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               268, 31
               

               Conread position:
               185-606
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 147
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 360
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 102
               

               Conread position:
               185-611
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 168
               

               Conread position:
               185-623
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 169
               

               Conread position:
               186-382
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               186-613
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 26
               

               Conread position:
               187-619
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 113
               

               Conread position:
               190-415
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               190-620
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               129, 49
               

               Conread position:
               194-524
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 135
               

               Conread position:
               199-611
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               7, 289
               

               Conread position:
               205-630
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 144
               

               Conread position:
               212-619
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 160
               

               Conread position:
               213-570
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               240-671
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               83, 35
               

               Conread position:
               252-611
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               67, 97
               

               Conread position:
               260-611
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               58, 46
               

               Conread position:
               267-619
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 85
               

               Conread position:
               275-611
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               277-619
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 81
               

               Conread position:
               324-611
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               111, 23
               

               Conread position:
               326-611
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               132, 23
               

               Conread position:
               326-611
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               343-611
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               348-613
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 184
               

               Conread position:
               349-611
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               367-619
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               69, 170
               

               Conread position:
               385-638
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               390-618
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               399-638
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 140
               
Show alignments to all cow chromosomes.