Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-149
Cow position: chr25:26279750-26279905 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 1-151
Cow position: chr25:27022071-27021909 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 44

Conread position: 1-151
Cow position: chr25:32580461-32580624 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-159
Cow position: chr25:20775423-20775257 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-164
Cow position: chr25:18175779-18175953 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 28

Conread position: 2-149
Cow position: chr25:13781535-13781695 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 2-149
Cow position: chr25:18889510-18889353 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr25:22148042-22148201 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 2-149
Cow position: chr25:25507205-25507365 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-151
Cow position: chr25:20630135-20630296 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-187
Cow position: chr25:33664719-33664520 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 164

Conread position: 3-149
Cow position: chr25:26879696-26879853 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 71

Conread position: 150-634
Cow position: chr25:34346158-34345654 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 75

Conread position: 151-504
Cow position: chr25:27525281-27524924 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 129

Conread position: 151-529
Cow position: chr25:36636828-36636436 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 124

Conread position: 152-403
Cow position: chr25:26880046-26880299 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 204

Conread position: 152-613
Cow position: chr25:20630488-20630959 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 224

Conread position: 152-619
Cow position: chr25:12941811-12941336 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-619
Cow position: chr25:18273910-18273436 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 125

Conread position: 152-619
Cow position: chr25:22148398-22148872 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-619
Cow position: chr25:24659341-24658877 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-659
Cow position: chr25:18182594-18183082 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 326
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 38

Conread position: 152-670
Cow position: chr25:24216602-24216087 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 206

Conread position: 152-671
Cow position: chr25:25507562-25508093 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 153-611
Cow position: chr25:18252019-18251588 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 315
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 84

Conread position: 153-611
Cow position: chr25:18888884-18888414 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 208

Conread position: 153-613
Cow position: chr25:17559692-17559235 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 220

Conread position: 153-638
Cow position: chr25:17588697-17588203 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 218

Conread position: 155-611
Cow position: chr25:20774513-20774044 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 164-602
Cow position: chr25:24947236-24946806 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 283
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 183

Conread position: 166-611
Cow position: chr25:27021711-27021263 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 167-607
Cow position: chr25:26928189-26928625 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 19

Conread position: 167-638
Cow position: chr25:18305025-18305489 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 187

Conread position: 179-639
Cow position: chr25:18450217-18450662 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 308
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 254, 15

Conread position: 184-619
Cow position: chr25:3377331-3376902 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 280
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 108

Conread position: 185-503
Cow position: chr25:11831183-11830871 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 155, 33

Conread position: 185-611
Cow position: chr25:13781931-13782363 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 169

Conread position: 185-611
Cow position: chr25:18177594-18178021 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 164

Conread position: 185-611
Cow position: chr25:18192866-18192433 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 83

Conread position: 192-485
Cow position: chr25:12758184-12757884 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 196-446
Cow position: chr25:18326001-18325753 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 91

Conread position: 233-620
Cow position: chr25:30266445-30266827 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 65

Conread position: 250-611
Cow position: chr25:11931815-11931457 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 34

Conread position: 329-611
Cow position: chr25:14957409-14957122 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 205

Conread position: 331-658
Cow position: chr25:17655487-17655814 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 343-612
Cow position: chr25:11041426-11041695 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 92, 23

Conread position: 349-618
Cow position: chr25:26899746-26900018 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 158

Conread position: 371-619
Cow position: chr25:33576099-33575845 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 29, 98

Show alignments to all cow chromosomes.