Cow genome map
Conread name: | Ss1.1-Pig4-TMW8032H19.3 |
Conread position: | 1-149 |
Cow position: | chr25:26279750-26279905 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 1-151 |
Cow position: | chr25:27022071-27021909 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 55, 44 |
Conread position: | 1-151 |
Cow position: | chr25:32580461-32580624 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-159 |
Cow position: | chr25:20775423-20775257 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1-164 |
Cow position: | chr25:18175779-18175953 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 67, 28 |
Conread position: | 2-149 |
Cow position: | chr25:13781535-13781695 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 2-149 |
Cow position: | chr25:18889510-18889353 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 2-149 |
Cow position: | chr25:22148042-22148201 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 2-149 |
Cow position: | chr25:25507205-25507365 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 2-151 |
Cow position: | chr25:20630135-20630296 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 2-187 |
Cow position: | chr25:33664719-33664520 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 54, 164 |
Conread position: | 3-149 |
Cow position: | chr25:26879696-26879853 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 53, 71 |
Conread position: | 150-634 |
Cow position: | chr25:34346158-34345654 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 75 |
Conread position: | 151-504 |
Cow position: | chr25:27525281-27524924 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 129 |
Conread position: | 151-529 |
Cow position: | chr25:36636828-36636436 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 274 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 13, 124 |
Conread position: | 152-403 |
Cow position: | chr25:26880046-26880299 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 189 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 37, 204 |
Conread position: | 152-613 |
Cow position: | chr25:20630488-20630959 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 224 |
Conread position: | 152-619 |
Cow position: | chr25:12941811-12941336 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 63 |
Conread position: | 152-619 |
Cow position: | chr25:18273910-18273436 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 125 |
Conread position: | 152-619 |
Cow position: | chr25:22148398-22148872 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 152-619 |
Cow position: | chr25:24659341-24658877 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 63 |
Conread position: | 152-659 |
Cow position: | chr25:18182594-18183082 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 326 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 16, 38 |
Conread position: | 152-670 |
Cow position: | chr25:24216602-24216087 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 206 |
Conread position: | 152-671 |
Cow position: | chr25:25507562-25508093 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 63 |
Conread position: | 153-611 |
Cow position: | chr25:18252019-18251588 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 315 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 13, 84 |
Conread position: | 153-611 |
Cow position: | chr25:18888884-18888414 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 208 |
Conread position: | 153-613 |
Cow position: | chr25:17559692-17559235 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 220 |
Conread position: | 153-638 |
Cow position: | chr25:17588697-17588203 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 218 |
Conread position: | 155-611 |
Cow position: | chr25:20774513-20774044 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 200 |
Conread position: | 164-602 |
Cow position: | chr25:24947236-24946806 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 283 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 24, 183 |
Conread position: | 166-611 |
Cow position: | chr25:27021711-27021263 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 191 |
Conread position: | 167-607 |
Cow position: | chr25:26928189-26928625 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 19 |
Conread position: | 167-638 |
Cow position: | chr25:18305025-18305489 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 187 |
Conread position: | 179-639 |
Cow position: | chr25:18450217-18450662 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 308 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 254, 15 |
Conread position: | 184-619 |
Cow position: | chr25:3377331-3376902 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 280 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 16, 108 |
Conread position: | 185-503 |
Cow position: | chr25:11831183-11830871 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 216 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 155, 33 |
Conread position: | 185-611 |
Cow position: | chr25:13781931-13782363 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 169 |
Conread position: | 185-611 |
Cow position: | chr25:18177594-18178021 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 164 |
Conread position: | 185-611 |
Cow position: | chr25:18192866-18192433 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 83 |
Conread position: | 192-485 |
Cow position: | chr25:12758184-12757884 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 196-446 |
Cow position: | chr25:18326001-18325753 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 173 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 123, 91 |
Conread position: | 233-620 |
Cow position: | chr25:30266445-30266827 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 267 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 57, 65 |
Conread position: | 250-611 |
Cow position: | chr25:11931815-11931457 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 34 |
Conread position: | 329-611 |
Cow position: | chr25:14957409-14957122 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 200 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 44, 205 |
Conread position: | 331-658 |
Cow position: | chr25:17655487-17655814 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 25 |
Conread position: | 343-612 |
Cow position: | chr25:11041426-11041695 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 202 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 92, 23 |
Conread position: | 349-618 |
Cow position: | chr25:26899746-26900018 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 197 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 81, 158 |
Conread position: | 371-619 |
Cow position: | chr25:33576099-33575845 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 186 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 29, 98 |
Show alignments to all cow chromosomes.