Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032H19.3
        

               Conread position:
               1-98
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 165
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 158
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               55, 165
               

               Conread position:
               2-117
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-149
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-163
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 172
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 158
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               4-151
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               8-149
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               125-619
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               133-492
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               139-613
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               144-613
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               340
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               20, 5
               

               Conread position:
               151-524
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               152-305
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               152-454
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 303
               

               Conread position:
               152-475
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               152-479
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               152-491
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-564
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 230
               

               Conread position:
               152-605
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 219
               

               Conread position:
               152-608
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               152-608
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 208
               

               Conread position:
               152-609
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 203
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 302
               

               Conread position:
               152-611
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-613
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 239
               

               Conread position:
               152-618
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 108
               

               Conread position:
               152-618
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-618
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               152-619
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 200
               

               Conread position:
               152-620
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               152-626
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               152-626
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               152-634
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               152-638
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               152-638
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 209
               

               Conread position:
               153-384
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               153-574
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               153-574
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 202
               

               Conread position:
               153-611
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               154-659
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 215
               

               Conread position:
               155-313
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               155-611
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               165-619
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 194
               

               Conread position:
               166-318
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               166-431
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               166-609
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 213
               

               Conread position:
               167-611
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 211
               

               Conread position:
               167-613
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 138
               

               Conread position:
               167-638
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 188
               

               Conread position:
               168-509
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               156, 78
               

               Conread position:
               171-611
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 299
               

               Conread position:
               171-623
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               317
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               179-475
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               71, 200
               

               Conread position:
               185-343
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               185-524
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 178
               

               Conread position:
               185-529
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               185-592
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               251, 46
               

               Conread position:
               185-618
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 169
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 138
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 24
               

               Conread position:
               185-619
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 32
               

               Conread position:
               185-684
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 168
               

               Conread position:
               188-526
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 172
               

               Conread position:
               190-611
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               120, 67
               

               Conread position:
               193-608
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               127, 55
               

               Conread position:
               199-658
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 112
               

               Conread position:
               199-670
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               66, 154
               

               Conread position:
               218-637
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 222
               

               Conread position:
               230-611
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 119
               

               Conread position:
               238-611
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               248-613
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 118
               

               Conread position:
               251-523
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               68, 98
               

               Conread position:
               254-611
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               263-611
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 5
               

               Conread position:
               268-619
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               274-562
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               303-611
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               340-611
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               346-609
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               351-613
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 190
               

               Conread position:
               360-611
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 169
               

               Conread position:
               362-626
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               374-619
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               405-613
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               28, 134
               
Show alignments to all cow chromosomes.