Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-119
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-150
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-154
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-162
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 152

Conread position: 1-187
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 165

Conread position: 1-204
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 164

Conread position: 2-98
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 2-149
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 4-163
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 84-503
Cow position:
Alignm length: 433
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 69

Conread position: 112-619
Cow position:
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 44

Conread position: 129-519
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 27

Conread position: 133-356
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 15

Conread position: 137-636
Cow position:
Alignm length: 513
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 29

Conread position: 139-611
Cow position:
Alignm length: 489
Alignm identity: 324
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 7

Conread position: 139-618
Cow position:
Alignm length: 498
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 139-619
Cow position:
Alignm length: 499
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 147-626
Cow position:
Alignm length: 494
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 209

Conread position: 149-436
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 223

Conread position: 149-448
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 212

Conread position: 152-345
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 108

Conread position: 152-399
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 152-429
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 63

Conread position: 152-430
Cow position:
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-431
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 152-607
Cow position:
Alignm length: 480
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 399

Conread position: 152-608
Cow position:
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 97

Conread position: 152-608
Cow position:
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-609
Cow position:
Alignm length: 476
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-611
Cow position:
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 204

Conread position: 152-613
Cow position:
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 50

Conread position: 152-613
Cow position:
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 140

Conread position: 152-613
Cow position:
Alignm length: 480
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 392

Conread position: 152-618
Cow position:
Alignm length: 484
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 152-618
Cow position:
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 66

Conread position: 152-619
Cow position:
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 59

Conread position: 152-631
Cow position:
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 211

Conread position: 152-671
Cow position:
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 153-611
Cow position:
Alignm length: 477
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 70

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 470
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 205

Conread position: 153-611
Cow position:
Alignm length: 475
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 208

Conread position: 153-619
Cow position:
Alignm length: 478
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 199

Conread position: 153-630
Cow position:
Alignm length: 494
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 132

Conread position: 154-584
Cow position:
Alignm length: 455
Alignm identity: 305
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 15, 215

Conread position: 154-618
Cow position:
Alignm length: 485
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 338

Conread position: 154-620
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 214

Conread position: 155-359
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 155-589
Cow position:
Alignm length: 452
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 146

Conread position: 155-611
Cow position:
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 119

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 222

Conread position: 155-611
Cow position:
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 52

Conread position: 155-611
Cow position:
Alignm length: 477
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 134

Conread position: 155-611
Cow position:
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 291

Conread position: 155-638
Cow position:
Alignm length: 504
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 202

Conread position: 158-608
Cow position:
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 184

Conread position: 158-611
Cow position:
Alignm length: 472
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 158-611
Cow position:
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 213

Conread position: 158-612
Cow position:
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 219

Conread position: 165-575
Cow position:
Alignm length: 420
Alignm identity: 277
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 154, 23

Conread position: 166-611
Cow position:
Alignm length: 459
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 198

Conread position: 167-608
Cow position:
Alignm length: 452
Alignm identity: 294
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 51

Conread position: 173-618
Cow position:
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 178

Conread position: 183-575
Cow position:
Alignm length: 407
Alignm identity: 274
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 108

Conread position: 183-630
Cow position:
Alignm length: 450
Alignm identity: 297
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 319, 25

Conread position: 184-503
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 104

Conread position: 185-371
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 47

Conread position: 185-484
Cow position:
Alignm length: 304
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 46

Conread position: 185-613
Cow position:
Alignm length: 441
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 84

Conread position: 185-618
Cow position:
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 24

Conread position: 185-619
Cow position:
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 169

Conread position: 185-619
Cow position:
Alignm length: 459
Alignm identity: 304
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 134, 177

Conread position: 186-612
Cow position:
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 164

Conread position: 186-616
Cow position:
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 43

Conread position: 187-620
Cow position:
Alignm length: 444
Alignm identity: 285
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 58

Conread position: 188-425
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 131, 13

Conread position: 188-611
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 13

Conread position: 190-619
Cow position:
Alignm length: 442
Alignm identity: 293
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 99, 107

Conread position: 191-670
Cow position:
Alignm length: 487
Alignm identity: 319
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 129, 13

Conread position: 196-611
Cow position:
Alignm length: 418
Alignm identity: 267
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 82

Conread position: 198-613
Cow position:
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 290

Conread position: 203-612
Cow position:
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 62

Conread position: 205-351
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 205-611
Cow position:
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 28

Conread position: 205-611
Cow position:
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 144

Conread position: 214-619
Cow position:
Alignm length: 415
Alignm identity: 284
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 103, 12

Conread position: 214-669
Cow position:
Alignm length: 463
Alignm identity: 311
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 112, 41

Conread position: 234-619
Cow position:
Alignm length: 399
Alignm identity: 263
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 87, 113

Conread position: 249-543
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 183, 128

Conread position: 266-659
Cow position:
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 202

Conread position: 300-619
Cow position:
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 54

Conread position: 304-613
Cow position:
Alignm length: 322
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 50

Conread position: 333-612
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 40

Conread position: 368-611
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 66, 168

Conread position: 383-618
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 53, 119

Conread position: 416-672
Cow position:
Alignm length: 264
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 36

Conread position: 424-611
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 25

Conread position: 455-657
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 82

Show alignments to all cow chromosomes.