Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-98
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-138
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-151
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 148

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-152
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-159
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 2-98
Cow position:
Alignm length: 98
Alignm identity: 85
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 2-139
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-151
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 134-341
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 18

Conread position: 134-631
Cow position:
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 18

Conread position: 134-638
Cow position:
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 143-401
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 23, 161

Conread position: 145-613
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 201

Conread position: 146-671
Cow position:
Alignm length: 543
Alignm identity: 352
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 171

Conread position: 149-609
Cow position:
Alignm length: 484
Alignm identity: 320
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 112

Conread position: 149-611
Cow position:
Alignm length: 474
Alignm identity: 312
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 124

Conread position: 151-613
Cow position:
Alignm length: 479
Alignm identity: 320
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 80

Conread position: 152-319
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 105

Conread position: 152-347
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 73

Conread position: 152-356
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 62

Conread position: 152-427
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 208

Conread position: 152-486
Cow position:
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 209

Conread position: 152-492
Cow position:
Alignm length: 353
Alignm identity: 237
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 215

Conread position: 152-579
Cow position:
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 152-605
Cow position:
Alignm length: 466
Alignm identity: 308
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 69

Conread position: 152-611
Cow position:
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-611
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 139

Conread position: 152-611
Cow position:
Alignm length: 478
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 209

Conread position: 152-612
Cow position:
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-613
Cow position:
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 232

Conread position: 152-613
Cow position:
Alignm length: 480
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position:
Alignm length: 480
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 107

Conread position: 152-618
Cow position:
Alignm length: 484
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 208

Conread position: 152-619
Cow position:
Alignm length: 488
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 145

Conread position: 152-619
Cow position:
Alignm length: 493
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 78

Conread position: 152-619
Cow position:
Alignm length: 487
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-619
Cow position:
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 194

Conread position: 152-619
Cow position:
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 170

Conread position: 152-619
Cow position:
Alignm length: 484
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 117

Conread position: 152-638
Cow position:
Alignm length: 505
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 102

Conread position: 152-638
Cow position:
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 385

Conread position: 152-638
Cow position:
Alignm length: 516
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 244

Conread position: 153-310
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 140

Conread position: 153-319
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 98

Conread position: 153-513
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-529
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-569
Cow position:
Alignm length: 432
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 149

Conread position: 153-611
Cow position:
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 153-611
Cow position:
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 86

Conread position: 153-611
Cow position:
Alignm length: 499
Alignm identity: 332
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 15, 287

Conread position: 153-613
Cow position:
Alignm length: 478
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 150

Conread position: 153-619
Cow position:
Alignm length: 474
Alignm identity: 301
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 125

Conread position: 154-611
Cow position:
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 201

Conread position: 154-611
Cow position:
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 202

Conread position: 154-619
Cow position:
Alignm length: 484
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 206

Conread position: 155-349
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 155-594
Cow position:
Alignm length: 467
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 233

Conread position: 155-611
Cow position:
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 205

Conread position: 155-611
Cow position:
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 206

Conread position: 155-611
Cow position:
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 202

Conread position: 155-611
Cow position:
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 80

Conread position: 155-611
Cow position:
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-619
Cow position:
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 70

Conread position: 158-585
Cow position:
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 197

Conread position: 158-611
Cow position:
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 224

Conread position: 158-620
Cow position:
Alignm length: 482
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 198

Conread position: 159-611
Cow position:
Alignm length: 467
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 382

Conread position: 166-300
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 166-438
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 73

Conread position: 166-530
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 220

Conread position: 166-611
Cow position:
Alignm length: 459
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 186

Conread position: 166-619
Cow position:
Alignm length: 471
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 200

Conread position: 167-601
Cow position:
Alignm length: 453
Alignm identity: 315
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 22, 48

Conread position: 167-618
Cow position:
Alignm length: 468
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 168-356
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 52

Conread position: 175-619
Cow position:
Alignm length: 471
Alignm identity: 320
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 187

Conread position: 184-619
Cow position:
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 105

Conread position: 185-319
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 185-381
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 154, 143

Conread position: 185-486
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 32

Conread position: 185-520
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 136, 72

Conread position: 185-539
Cow position:
Alignm length: 367
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 118

Conread position: 185-561
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 120

Conread position: 185-568
Cow position:
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 97

Conread position: 185-608
Cow position:
Alignm length: 432
Alignm identity: 265
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 170, 81

Conread position: 185-611
Cow position:
Alignm length: 444
Alignm identity: 300
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 141, 65

Conread position: 185-611
Cow position:
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 169

Conread position: 185-613
Cow position:
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 129

Conread position: 185-619
Cow position:
Alignm length: 452
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 301

Conread position: 185-619
Cow position:
Alignm length: 468
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 85

Conread position: 185-620
Cow position:
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 185-658
Cow position:
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 168

Conread position: 185-658
Cow position:
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 186-442
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 135, 254

Conread position: 186-631
Cow position:
Alignm length: 455
Alignm identity: 306
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 13, 18

Conread position: 187-659
Cow position:
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 8

Conread position: 188-622
Cow position:
Alignm length: 441
Alignm identity: 282
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 245, 84

Conread position: 190-619
Cow position:
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 338

Conread position: 190-638
Cow position:
Alignm length: 477
Alignm identity: 321
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 100, 178

Conread position: 191-611
Cow position:
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 191-626
Cow position:
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 181

Conread position: 198-596
Cow position:
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 145

Conread position: 198-619
Cow position:
Alignm length: 434
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 70

Conread position: 199-484
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 99, 17

Conread position: 201-613
Cow position:
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 152

Conread position: 211-638
Cow position:
Alignm length: 435
Alignm identity: 296
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 219, 94

Conread position: 238-574
Cow position:
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 11

Conread position: 258-627
Cow position:
Alignm length: 379
Alignm identity: 257
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 91

Conread position: 259-612
Cow position:
Alignm length: 362
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 201, 88

Conread position: 275-633
Cow position:
Alignm length: 367
Alignm identity: 255
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 45, 80

Conread position: 277-611
Cow position:
Alignm length: 347
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 101

Conread position: 278-671
Cow position:
Alignm length: 403
Alignm identity: 261
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 53

Conread position: 280-612
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 75

Conread position: 296-619
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 57

Conread position: 326-613
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 23

Conread position: 339-611
Cow position:
Alignm length: 278
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 91, 21

Conread position: 345-491
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 21

Conread position: 349-613
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 24

Conread position: 354-611
Cow position:
Alignm length: 261
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 20

Conread position: 381-619
Cow position:
Alignm length: 247
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 55, 68

Conread position: 386-609
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 149

Conread position: 429-611
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 5

Show alignments to all cow chromosomes.