Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032H19.3 |
| Conread position: | 1-98 |
| Cow position: | chr6:14852153-14852055 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-149 |
| Cow position: | chr6:27529577-27529416 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-149 |
| Cow position: | chr6:40973707-40973863 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-149 |
| Cow position: | chr6:51714128-51714285 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-151 |
| Cow position: | chr6:186045-185882 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr6:7141038-7140875 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr6:17597866-17597704 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr6:27170006-27170167 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 1-151 |
| Cow position: | chr6:40252085-40252248 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:30479534-30479719 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 160 |
| Conread position: | 1-204 |
| Cow position: | chr6:2375125-2375337 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 165 |
| Conread position: | 1-204 |
| Cow position: | chr6:40275512-40275727 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 176 |
| Conread position: | 2-117 |
| Cow position: | chr6:8202168-8202289 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-139 |
| Cow position: | chr6:30274747-30274602 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-139 |
| Cow position: | chr6:34892574-34892425 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-139 |
| Cow position: | chr6:36526480-36526627 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:3889053-3888897 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:5949349-5949189 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:15140754-15140597 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:15280126-15279971 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:17046485-17046645 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:27471030-27471187 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:40867130-40866975 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:58027179-58027339 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr6:64715661-64715816 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-154 |
| Cow position: | chr6:13317076-13316911 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-187 |
| Cow position: | chr6:10643979-10644163 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 104 |
| Conread position: | 2-206 |
| Cow position: | chr6:3487994-3487781 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 172 |
| Conread position: | 2-206 |
| Cow position: | chr6:35876284-35876072 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 157 |
| Conread position: | 110-619 |
| Cow position: | chr6:13316732-13316209 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 130-435 |
| Cow position: | chr6:54179767-54180080 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 133-528 |
| Cow position: | chr6:38271653-38272049 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 134-638 |
| Cow position: | chr6:28133695-28134187 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 137-620 |
| Cow position: | chr6:66193748-66193257 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 138-671 |
| Cow position: | chr6:27529236-27528687 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 139-433 |
| Cow position: | chr6:6475098-6474792 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 139-470 |
| Cow position: | chr6:43792944-43792611 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 139-611 |
| Cow position: | chr6:21973426-21973921 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 139-611 |
| Cow position: | chr6:33899468-33898999 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 139-618 |
| Cow position: | chr6:28105091-28104602 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 149-618 |
| Cow position: | chr6:3888706-3888248 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 18 |
| Conread position: | 151-611 |
| Cow position: | chr6:40553793-40553324 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 152-347 |
| Cow position: | chr6:25794032-25793826 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-484 |
| Cow position: | chr6:65881993-65882334 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 152-503 |
| Cow position: | chr6:39438546-39438907 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-529 |
| Cow position: | chr6:6567371-6567753 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 217 |
| Conread position: | 152-608 |
| Cow position: | chr6:3276593-3276124 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 221 |
| Conread position: | 152-608 |
| Cow position: | chr6:34891343-34890875 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-611 |
| Cow position: | chr6:8202964-8203428 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 221 |
| Conread position: | 152-611 |
| Cow position: | chr6:15279030-15278565 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-613 |
| Cow position: | chr6:914412-914886 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 152-613 |
| Cow position: | chr6:8760509-8760046 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-613 |
| Cow position: | chr6:17046840-17047305 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 152-613 |
| Cow position: | chr6:20560325-20559850 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 212 |
| Conread position: | 152-613 |
| Cow position: | chr6:27471383-27471830 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 152-613 |
| Cow position: | chr6:28169685-28170154 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 203 |
| Conread position: | 152-613 |
| Cow position: | chr6:30274110-30273642 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 152-613 |
| Cow position: | chr6:47042420-47041964 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-613 |
| Cow position: | chr6:51086724-51087193 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-613 |
| Cow position: | chr6:51715321-51715778 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 244 |
| Conread position: | 152-613 |
| Cow position: | chr6:58027457-58027927 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 229 |
| Conread position: | 152-618 |
| Cow position: | chr6:15140400-15139919 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 212 |
| Conread position: | 152-618 |
| Cow position: | chr6:51730879-51731338 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 55 |
| Conread position: | 152-619 |
| Cow position: | chr6:5948996-5948524 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-619 |
| Cow position: | chr6:39334088-39333610 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-619 |
| Cow position: | chr6:40866536-40866065 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 152-634 |
| Cow position: | chr6:35875935-35875438 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 394 |
| Conread position: | 152-638 |
| Cow position: | chr6:41190103-41190575 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 152-684 |
| Cow position: | chr6:11724328-11723790 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 334 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 14, 96 |
| Conread position: | 153-346 |
| Cow position: | chr6:185686-185482 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 153-362 |
| Cow position: | chr6:40252443-40252660 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 153-397 |
| Cow position: | chr6:33991609-33991369 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 6 |
| Conread position: | 153-401 |
| Cow position: | chr6:30479884-30480140 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 153-467 |
| Cow position: | chr6:46573825-46573501 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 153-599 |
| Cow position: | chr6:1404810-1404352 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 211 |
| Conread position: | 153-599 |
| Cow position: | chr6:1410876-1410418 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 211 |
| Conread position: | 153-611 |
| Cow position: | chr6:40275870-40276336 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 140 |
| Conread position: | 153-611 |
| Cow position: | chr6:65821191-65820722 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 219 |
| Conread position: | 153-613 |
| Cow position: | chr6:25215004-25215457 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 153-618 |
| Cow position: | chr6:27170357-27170838 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 208 |
| Conread position: | 153-619 |
| Cow position: | chr6:58601262-58601740 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 348 |
| Conread position: | 154-345 |
| Cow position: | chr6:27332534-27332734 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 155 |
| Conread position: | 154-611 |
| Cow position: | chr6:50646401-50645933 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 201 |
| Conread position: | 154-624 |
| Cow position: | chr6:52693800-52694282 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 189 |
| Conread position: | 155-318 |
| Cow position: | chr6:7140677-7140510 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 155-529 |
| Cow position: | chr6:3150048-3150432 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 167 |
| Conread position: | 155-573 |
| Cow position: | chr6:68027706-68028124 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 233 |
| Conread position: | 155-610 |
| Cow position: | chr6:44149772-44149301 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 203 |
| Conread position: | 155-611 |
| Cow position: | chr6:330682-330216 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 203 |
| Conread position: | 155-611 |
| Cow position: | chr6:12665535-12665068 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 200 |
| Conread position: | 155-611 |
| Cow position: | chr6:13104842-13105311 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 155-611 |
| Cow position: | chr6:13310576-13310106 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 223 |
| Conread position: | 155-611 |
| Cow position: | chr6:13847810-13848271 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 201 |
| Conread position: | 155-611 |
| Cow position: | chr6:13944692-13945160 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 155-611 |
| Cow position: | chr6:17597534-17597061 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 232 |
| Conread position: | 155-611 |
| Cow position: | chr6:26670081-26669614 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 203 |
| Conread position: | 155-611 |
| Cow position: | chr6:39910118-39910586 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 205 |
| Conread position: | 166-611 |
| Cow position: | chr6:43618512-43618971 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 320 |
| Conread position: | 166-612 |
| Cow position: | chr6:2375495-2375941 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 167-608 |
| Cow position: | chr6:4258949-4258516 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 167-613 |
| Cow position: | chr6:18973611-18973163 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 193 |
| Conread position: | 167-619 |
| Cow position: | chr6:10339799-10339368 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 172-503 |
| Cow position: | chr6:34027175-34027499 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 254, 23 |
| Conread position: | 176-565 |
| Cow position: | chr6:32449096-32448707 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 144, 177 |
| Conread position: | 178-410 |
| Cow position: | chr6:1099344-1099112 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 86, 117 |
| Conread position: | 184-415 |
| Cow position: | chr6:31565339-31565106 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 137, 163 |
| Conread position: | 184-593 |
| Cow position: | chr6:7834344-7834744 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 185-319 |
| Cow position: | chr6:64716806-64716940 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-426 |
| Cow position: | chr6:59918255-59918006 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 185-485 |
| Cow position: | chr6:44550335-44550039 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 135, 23 |
| Conread position: | 185-528 |
| Cow position: | chr6:16635073-16635413 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 149, 102 |
| Conread position: | 185-596 |
| Cow position: | chr6:1821806-1821377 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 185-609 |
| Cow position: | chr6:703037-703461 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 111 |
| Conread position: | 185-611 |
| Cow position: | chr6:1382484-1382073 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 161, 61 |
| Conread position: | 185-611 |
| Cow position: | chr6:15477982-15478425 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 309 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 109, 28 |
| Conread position: | 185-611 |
| Cow position: | chr6:58065550-58065988 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 179 |
| Conread position: | 185-611 |
| Cow position: | chr6:66232634-66233059 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 178 |
| Conread position: | 185-613 |
| Cow position: | chr6:24239878-24240305 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 81 |
| Conread position: | 185-613 |
| Cow position: | chr6:65842445-65842866 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 197 |
| Conread position: | 185-619 |
| Cow position: | chr6:3487603-3487169 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 183 |
| Conread position: | 185-632 |
| Cow position: | chr6:10644562-10645008 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 78 |
| Conread position: | 185-641 |
| Cow position: | chr6:50634766-50635235 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 186-475 |
| Cow position: | chr6:65941001-65940707 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 133, 161 |
| Conread position: | 186-620 |
| Cow position: | chr6:17244579-17244153 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 135, 163 |
| Conread position: | 190-637 |
| Cow position: | chr6:538813-539251 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 131, 102 |
| Conread position: | 190-684 |
| Cow position: | chr6:32416456-32416950 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 150, 60 |
| Conread position: | 191-619 |
| Cow position: | chr6:7178469-7178030 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 264 |
| Conread position: | 191-634 |
| Cow position: | chr6:184956-184506 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 194-619 |
| Cow position: | chr6:36527130-36527564 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 199-658 |
| Cow position: | chr6:21836359-21835879 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 438 |
| Conread position: | 202-619 |
| Cow position: | chr6:44262654-44262211 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 203-613 |
| Cow position: | chr6:62095599-62095169 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 121, 167 |
| Conread position: | 205-608 |
| Cow position: | chr6:11871805-11871407 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 205-610 |
| Cow position: | chr6:10609747-10610124 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 295, 74 |
| Conread position: | 213-638 |
| Cow position: | chr6:11274065-11273626 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 277 |
| Conread position: | 227-659 |
| Cow position: | chr6:66546356-66546785 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 91, 24 |
| Conread position: | 228-613 |
| Cow position: | chr6:55542402-55542005 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 125 |
| Conread position: | 229-619 |
| Cow position: | chr6:31636550-31636172 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 230-613 |
| Cow position: | chr6:1535712-1535323 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 123 |
| Conread position: | 234-611 |
| Cow position: | chr6:40326284-40326665 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 115 |
| Conread position: | 250-616 |
| Cow position: | chr6:28275893-28276265 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 103 |
| Conread position: | 259-619 |
| Cow position: | chr6:29312396-29312760 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 61, 95 |
| Conread position: | 260-611 |
| Cow position: | chr6:50713-50355 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 260-619 |
| Cow position: | chr6:10632451-10632804 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 270-611 |
| Cow position: | chr6:9263997-9264339 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 271-611 |
| Cow position: | chr6:45586868-45587199 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 273-613 |
| Cow position: | chr6:10250690-10250355 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 282-611 |
| Cow position: | chr6:14761989-14761666 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 287-613 |
| Cow position: | chr6:64716962-64717275 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 318-611 |
| Cow position: | chr6:7140373-7140092 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 184, 15 |
| Conread position: | 324-611 |
| Cow position: | chr6:3784731-3785018 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 324-611 |
| Cow position: | chr6:28187853-28187572 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 331-611 |
| Cow position: | chr6:16053077-16053357 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 332-619 |
| Cow position: | chr6:48580018-48579736 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 343-619 |
| Cow position: | chr6:40316567-40316841 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 344-611 |
| Cow position: | chr6:41332-41073 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 216, 104 |
| Conread position: | 366-618 |
| Cow position: | chr6:25792754-25792501 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 175 |
| Conread position: | 378-611 |
| Cow position: | chr6:40379617-40379383 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 405-631 |
| Cow position: | chr6:35419235-35419010 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 72 |
Show alignments to all cow chromosomes.