Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-98
Cow position: chr6:14852153-14852055 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-149
Cow position: chr6:27529577-27529416 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-149
Cow position: chr6:40973707-40973863 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-149
Cow position: chr6:51714128-51714285 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-151
Cow position: chr6:186045-185882 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position: chr6:7141038-7140875 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position: chr6:17597866-17597704 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position: chr6:27170006-27170167 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 28

Conread position: 1-151
Cow position: chr6:40252085-40252248 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-180
Cow position: chr6:30479534-30479719 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 160

Conread position: 1-204
Cow position: chr6:2375125-2375337 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 165

Conread position: 1-204
Cow position: chr6:40275512-40275727 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 176

Conread position: 2-117
Cow position: chr6:8202168-8202289 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position: chr6:30274747-30274602 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position: chr6:34892574-34892425 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position: chr6:36526480-36526627 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr6:3889053-3888897 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 2-149
Cow position: chr6:5949349-5949189 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr6:15140754-15140597 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr6:15280126-15279971 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr6:17046485-17046645 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr6:27471030-27471187 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 2-149
Cow position: chr6:40867130-40866975 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr6:58027179-58027339 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position: chr6:64715661-64715816 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-154
Cow position: chr6:13317076-13316911 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 2-187
Cow position: chr6:10643979-10644163 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 104

Conread position: 2-206
Cow position: chr6:3487994-3487781 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 172

Conread position: 2-206
Cow position: chr6:35876284-35876072 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 157

Conread position: 110-619
Cow position: chr6:13316732-13316209 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 130-435
Cow position: chr6:54179767-54180080 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 24

Conread position: 133-528
Cow position: chr6:38271653-38272049 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 134-638
Cow position: chr6:28133695-28134187 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 137-620
Cow position: chr6:66193748-66193257 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 311
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 23

Conread position: 138-671
Cow position: chr6:27529236-27528687 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 14

Conread position: 139-433
Cow position: chr6:6475098-6474792 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 139-470
Cow position: chr6:43792944-43792611 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 13

Conread position: 139-611
Cow position: chr6:21973426-21973921 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 139-611
Cow position: chr6:33899468-33898999 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 313
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 13

Conread position: 139-618
Cow position: chr6:28105091-28104602 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 149-618
Cow position: chr6:3888706-3888248 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 18

Conread position: 151-611
Cow position: chr6:40553793-40553324 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 63

Conread position: 152-347
Cow position: chr6:25794032-25793826 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 152-484
Cow position: chr6:65881993-65882334 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 86

Conread position: 152-503
Cow position: chr6:39438546-39438907 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-529
Cow position: chr6:6567371-6567753 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 217

Conread position: 152-608
Cow position: chr6:3276593-3276124 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 221

Conread position: 152-608
Cow position: chr6:34891343-34890875 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-611
Cow position: chr6:8202964-8203428 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 221

Conread position: 152-611
Cow position: chr6:15279030-15278565 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position: chr6:914412-914886 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 125

Conread position: 152-613
Cow position: chr6:8760509-8760046 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position: chr6:17046840-17047305 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 152-613
Cow position: chr6:20560325-20559850 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 212

Conread position: 152-613
Cow position: chr6:27471383-27471830 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-613
Cow position: chr6:28169685-28170154 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 203

Conread position: 152-613
Cow position: chr6:30274110-30273642 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 89

Conread position: 152-613
Cow position: chr6:47042420-47041964 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position: chr6:51086724-51087193 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position: chr6:51715321-51715778 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 244

Conread position: 152-613
Cow position: chr6:58027457-58027927 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 229

Conread position: 152-618
Cow position: chr6:15140400-15139919 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 212

Conread position: 152-618
Cow position: chr6:51730879-51731338 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 55

Conread position: 152-619
Cow position: chr6:5948996-5948524 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-619
Cow position: chr6:39334088-39333610 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-619
Cow position: chr6:40866536-40866065 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 123

Conread position: 152-634
Cow position: chr6:35875935-35875438 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 394

Conread position: 152-638
Cow position: chr6:41190103-41190575 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 57

Conread position: 152-684
Cow position: chr6:11724328-11723790 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 334
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 96

Conread position: 153-346
Cow position: chr6:185686-185482 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 153-362
Cow position: chr6:40252443-40252660 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 140

Conread position: 153-397
Cow position: chr6:33991609-33991369 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 6

Conread position: 153-401
Cow position: chr6:30479884-30480140 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 100

Conread position: 153-467
Cow position: chr6:46573825-46573501 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-599
Cow position: chr6:1404810-1404352 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 314
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 211

Conread position: 153-599
Cow position: chr6:1410876-1410418 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 314
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 211

Conread position: 153-611
Cow position: chr6:40275870-40276336 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 140

Conread position: 153-611
Cow position: chr6:65821191-65820722 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 219

Conread position: 153-613
Cow position: chr6:25215004-25215457 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 62

Conread position: 153-618
Cow position: chr6:27170357-27170838 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 153-619
Cow position: chr6:58601262-58601740 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 348

Conread position: 154-345
Cow position: chr6:27332534-27332734 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 155

Conread position: 154-611
Cow position: chr6:50646401-50645933 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 201

Conread position: 154-624
Cow position: chr6:52693800-52694282 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 189

Conread position: 155-318
Cow position: chr6:7140677-7140510 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 137

Conread position: 155-529
Cow position: chr6:3150048-3150432 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 167

Conread position: 155-573
Cow position: chr6:68027706-68028124 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 291
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 233

Conread position: 155-610
Cow position: chr6:44149772-44149301 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 203

Conread position: 155-611
Cow position: chr6:330682-330216 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 203

Conread position: 155-611
Cow position: chr6:12665535-12665068 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-611
Cow position: chr6:13104842-13105311 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 118

Conread position: 155-611
Cow position: chr6:13310576-13310106 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 223

Conread position: 155-611
Cow position: chr6:13847810-13848271 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 201

Conread position: 155-611
Cow position: chr6:13944692-13945160 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 70

Conread position: 155-611
Cow position: chr6:17597534-17597061 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 232

Conread position: 155-611
Cow position: chr6:26670081-26669614 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 203

Conread position: 155-611
Cow position: chr6:39910118-39910586 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 205

Conread position: 166-611
Cow position: chr6:43618512-43618971 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 320

Conread position: 166-612
Cow position: chr6:2375495-2375941 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 167-608
Cow position: chr6:4258949-4258516 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 289
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 43

Conread position: 167-613
Cow position: chr6:18973611-18973163 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 193

Conread position: 167-619
Cow position: chr6:10339799-10339368 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 172-503
Cow position: chr6:34027175-34027499 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 254, 23

Conread position: 176-565
Cow position: chr6:32449096-32448707 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 144, 177

Conread position: 178-410
Cow position: chr6:1099344-1099112 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 86, 117

Conread position: 184-415
Cow position: chr6:31565339-31565106 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 163

Conread position: 184-593
Cow position: chr6:7834344-7834744 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 282
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 139, 15

Conread position: 185-319
Cow position: chr6:64716806-64716940 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 185-426
Cow position: chr6:59918255-59918006 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 185-485
Cow position: chr6:44550335-44550039 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 135, 23

Conread position: 185-528
Cow position: chr6:16635073-16635413 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 149, 102

Conread position: 185-596
Cow position: chr6:1821806-1821377 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 185-609
Cow position: chr6:703037-703461 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 111

Conread position: 185-611
Cow position: chr6:1382484-1382073 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 288
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 161, 61

Conread position: 185-611
Cow position: chr6:15477982-15478425 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 109, 28

Conread position: 185-611
Cow position: chr6:58065550-58065988 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 179

Conread position: 185-611
Cow position: chr6:66232634-66233059 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 178

Conread position: 185-613
Cow position: chr6:24239878-24240305 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 81

Conread position: 185-613
Cow position: chr6:65842445-65842866 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 197

Conread position: 185-619
Cow position: chr6:3487603-3487169 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 183

Conread position: 185-632
Cow position: chr6:10644562-10645008 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 78

Conread position: 185-641
Cow position: chr6:50634766-50635235 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 186-475
Cow position: chr6:65941001-65940707 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 161

Conread position: 186-620
Cow position: chr6:17244579-17244153 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 135, 163

Conread position: 190-637
Cow position: chr6:538813-539251 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 314
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 131, 102

Conread position: 190-684
Cow position: chr6:32416456-32416950 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 318
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 150, 60

Conread position: 191-619
Cow position: chr6:7178469-7178030 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 264

Conread position: 191-634
Cow position: chr6:184956-184506 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 7

Conread position: 194-619
Cow position: chr6:36527130-36527564 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 27

Conread position: 199-658
Cow position: chr6:21836359-21835879 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 438

Conread position: 202-619
Cow position: chr6:44262654-44262211 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 40

Conread position: 203-613
Cow position: chr6:62095599-62095169 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 167

Conread position: 205-608
Cow position: chr6:11871805-11871407 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 77

Conread position: 205-610
Cow position: chr6:10609747-10610124 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 295, 74

Conread position: 213-638
Cow position: chr6:11274065-11273626 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 277

Conread position: 227-659
Cow position: chr6:66546356-66546785 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 91, 24

Conread position: 228-613
Cow position: chr6:55542402-55542005 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 125

Conread position: 229-619
Cow position: chr6:31636550-31636172 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 275
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 95, 123

Conread position: 230-613
Cow position: chr6:1535712-1535323 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 123

Conread position: 234-611
Cow position: chr6:40326284-40326665 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 115

Conread position: 250-616
Cow position: chr6:28275893-28276265 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 103

Conread position: 259-619
Cow position: chr6:29312396-29312760 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 61, 95

Conread position: 260-611
Cow position: chr6:50713-50355 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 93

Conread position: 260-619
Cow position: chr6:10632451-10632804 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 92

Conread position: 270-611
Cow position: chr6:9263997-9264339 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 49, 79

Conread position: 271-611
Cow position: chr6:45586868-45587199 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 25

Conread position: 273-613
Cow position: chr6:10250690-10250355 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 282-611
Cow position: chr6:14761989-14761666 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 18, 68

Conread position: 287-613
Cow position: chr6:64716962-64717275 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 41

Conread position: 318-611
Cow position: chr6:7140373-7140092 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 184, 15

Conread position: 324-611
Cow position: chr6:3784731-3785018 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 23

Conread position: 324-611
Cow position: chr6:28187853-28187572 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 23

Conread position: 331-611
Cow position: chr6:16053077-16053357 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 99, 16

Conread position: 332-619
Cow position: chr6:48580018-48579736 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 102, 17

Conread position: 343-619
Cow position: chr6:40316567-40316841 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 23

Conread position: 344-611
Cow position: chr6:41332-41073 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 216, 104

Conread position: 366-618
Cow position: chr6:25792754-25792501 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 175

Conread position: 378-611
Cow position: chr6:40379617-40379383 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 29

Conread position: 405-631
Cow position: chr6:35419235-35419010 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 72

Show alignments to all cow chromosomes.