Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-149
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-151
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-159
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-204
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 176

Conread position: 1-204
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 164

Conread position: 2-102
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-117
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 100

Conread position: 2-137
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 2-139
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 48

Conread position: 2-149
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 2-151
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 2-154
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 121

Conread position: 4-149
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 4-172
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 162

Conread position: 36-611
Cow position:
Alignm length: 588
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 8

Conread position: 88-421
Cow position:
Alignm length: 347
Alignm identity: 241
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 40

Conread position: 108-394
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 45

Conread position: 132-638
Cow position:
Alignm length: 518
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 134-619
Cow position:
Alignm length: 499
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 135-406
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 17

Conread position: 139-619
Cow position:
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 139-619
Cow position:
Alignm length: 498
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 139-638
Cow position:
Alignm length: 517
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 246

Conread position: 151-608
Cow position:
Alignm length: 478
Alignm identity: 319
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 37, 17

Conread position: 152-442
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 152-445
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 152-486
Cow position:
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-503
Cow position:
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 152-539
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 263

Conread position: 152-554
Cow position:
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 129

Conread position: 152-562
Cow position:
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-571
Cow position:
Alignm length: 461
Alignm identity: 318
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 16, 101

Conread position: 152-611
Cow position:
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 249

Conread position: 152-611
Cow position:
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 198

Conread position: 152-611
Cow position:
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 152-611
Cow position:
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 207

Conread position: 152-613
Cow position:
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 193

Conread position: 152-613
Cow position:
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 218

Conread position: 152-618
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 152-618
Cow position:
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 152-619
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 290

Conread position: 152-619
Cow position:
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 226

Conread position: 152-619
Cow position:
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 273

Conread position: 152-619
Cow position:
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 152-620
Cow position:
Alignm length: 487
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 152-638
Cow position:
Alignm length: 503
Alignm identity: 330
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 233

Conread position: 153-319
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 153-385
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 15, 202

Conread position: 153-395
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 59

Conread position: 153-400
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 147

Conread position: 153-543
Cow position:
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 98

Conread position: 153-611
Cow position:
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 203

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 127

Conread position: 153-611
Cow position:
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-634
Cow position:
Alignm length: 501
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 220

Conread position: 154-608
Cow position:
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 201

Conread position: 154-613
Cow position:
Alignm length: 473
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 59

Conread position: 154-619
Cow position:
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 205

Conread position: 155-503
Cow position:
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 155-611
Cow position:
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 190

Conread position: 155-611
Cow position:
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 222

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 213

Conread position: 155-611
Cow position:
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 155-636
Cow position:
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-684
Cow position:
Alignm length: 547
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 217

Conread position: 158-351
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 109

Conread position: 158-611
Cow position:
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 159-619
Cow position:
Alignm length: 485
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 303

Conread position: 159-620
Cow position:
Alignm length: 479
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 164-529
Cow position:
Alignm length: 375
Alignm identity: 245
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 108

Conread position: 164-611
Cow position:
Alignm length: 467
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 204

Conread position: 166-499
Cow position:
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 23

Conread position: 166-618
Cow position:
Alignm length: 472
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 189

Conread position: 166-658
Cow position:
Alignm length: 526
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 243

Conread position: 167-611
Cow position:
Alignm length: 471
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 115

Conread position: 171-601
Cow position:
Alignm length: 440
Alignm identity: 271
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 127

Conread position: 172-611
Cow position:
Alignm length: 451
Alignm identity: 305
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 135

Conread position: 172-620
Cow position:
Alignm length: 465
Alignm identity: 295
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 145, 38

Conread position: 173-613
Cow position:
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 138

Conread position: 174-619
Cow position:
Alignm length: 465
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 185

Conread position: 185-431
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 154, 68

Conread position: 185-485
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 134, 64

Conread position: 185-491
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 169

Conread position: 185-503
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 134, 111

Conread position: 185-611
Cow position:
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 167

Conread position: 185-611
Cow position:
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 188

Conread position: 185-611
Cow position:
Alignm length: 438
Alignm identity: 289
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 139, 18

Conread position: 185-613
Cow position:
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 30

Conread position: 185-618
Cow position:
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 357

Conread position: 185-618
Cow position:
Alignm length: 442
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 19

Conread position: 185-619
Cow position:
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 176

Conread position: 185-619
Cow position:
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 126

Conread position: 185-619
Cow position:
Alignm length: 461
Alignm identity: 309
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 75, 70

Conread position: 185-619
Cow position:
Alignm length: 458
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 185-619
Cow position:
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 23

Conread position: 185-636
Cow position:
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 169

Conread position: 185-638
Cow position:
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 24

Conread position: 186-504
Cow position:
Alignm length: 326
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 135, 23

Conread position: 186-611
Cow position:
Alignm length: 427
Alignm identity: 277
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 316, 50

Conread position: 186-613
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 168

Conread position: 190-613
Cow position:
Alignm length: 435
Alignm identity: 296
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 102, 129

Conread position: 190-617
Cow position:
Alignm length: 443
Alignm identity: 294
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 158

Conread position: 195-401
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 154

Conread position: 198-619
Cow position:
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 90

Conread position: 199-611
Cow position:
Alignm length: 438
Alignm identity: 290
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 151

Conread position: 199-611
Cow position:
Alignm length: 427
Alignm identity: 274
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 148, 7

Conread position: 200-638
Cow position:
Alignm length: 451
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 172

Conread position: 201-411
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 84

Conread position: 204-671
Cow position:
Alignm length: 474
Alignm identity: 307
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 45

Conread position: 205-611
Cow position:
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 273

Conread position: 215-410
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 104, 72

Conread position: 221-611
Cow position:
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 45

Conread position: 224-611
Cow position:
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 125

Conread position: 224-611
Cow position:
Alignm length: 398
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 92

Conread position: 227-445
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 142

Conread position: 238-658
Cow position:
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 125

Conread position: 247-620
Cow position:
Alignm length: 384
Alignm identity: 255
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 93

Conread position: 248-611
Cow position:
Alignm length: 373
Alignm identity: 244
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 87

Conread position: 260-574
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 13

Conread position: 260-574
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 7

Conread position: 260-618
Cow position:
Alignm length: 366
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 176, 36

Conread position: 265-616
Cow position:
Alignm length: 359
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 113

Conread position: 271-487
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 278-620
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 76

Conread position: 279-531
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 23

Conread position: 309-611
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 42

Conread position: 329-619
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 38

Conread position: 335-619
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 166, 39

Conread position: 378-611
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 67

Conread position: 390-619
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 28

Conread position: 420-611
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 119

Conread position: 454-611
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 83

Conread position: 494-613
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.