Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032H19.3 |
| Conread position: | 1-139 |
| Cow position: | chr9:28678326-28678477 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-149 |
| Cow position: | chr9:51211035-51211196 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr9:780451-780288 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr9:1980344-1980507 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr9:14762091-14761933 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 1-151 |
| Cow position: | chr9:17064034-17063871 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-151 |
| Cow position: | chr9:25187459-25187622 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 1-159 |
| Cow position: | chr9:1075844-1075675 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 156 |
| Conread position: | 1-159 |
| Cow position: | chr9:30827033-30827204 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-159 |
| Cow position: | chr9:44818536-44818701 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 1-159 |
| Cow position: | chr9:45873699-45873870 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-160 |
| Cow position: | chr9:13476527-13476352 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-204 |
| Cow position: | chr9:50791067-50791280 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 163 |
| Conread position: | 1-206 |
| Cow position: | chr9:4943459-4943241 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 165 |
| Conread position: | 2-139 |
| Cow position: | chr9:32969305-32969455 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr9:3543199-3543359 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr9:7003143-7003290 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 99 |
| Conread position: | 2-149 |
| Cow position: | chr9:10322160-10322319 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-149 |
| Cow position: | chr9:59536451-59536611 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-151 |
| Cow position: | chr9:31807925-31808087 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-156 |
| Cow position: | chr9:42569261-42569423 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 156 |
| Conread position: | 2-205 |
| Cow position: | chr9:29027844-29027632 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 172 |
| Conread position: | 2-206 |
| Cow position: | chr9:9013458-9013671 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 2-206 |
| Cow position: | chr9:51181830-51181615 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 161 |
| Conread position: | 3-176 |
| Cow position: | chr9:34722266-34722445 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 4-149 |
| Cow position: | chr9:37162452-37162299 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 108-611 |
| Cow position: | chr9:10937264-10937775 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 134-608 |
| Cow position: | chr9:25187802-25188278 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 135-619 |
| Cow position: | chr9:26083830-26083371 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 139-616 |
| Cow position: | chr9:35316166-35315695 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 149-503 |
| Cow position: | chr9:34722614-34722979 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 152-319 |
| Cow position: | chr9:6829604-6829434 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-319 |
| Cow position: | chr9:59173434-59173264 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-334 |
| Cow position: | chr9:42569614-42569807 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-425 |
| Cow position: | chr9:26102376-26102106 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 152-445 |
| Cow position: | chr9:2171758-2172066 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 152-446 |
| Cow position: | chr9:2186589-2186894 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 152-467 |
| Cow position: | chr9:9706258-9706582 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 152-476 |
| Cow position: | chr9:2210004-2210349 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 148 |
| Conread position: | 152-590 |
| Cow position: | chr9:239781-239319 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 359 |
| Conread position: | 152-606 |
| Cow position: | chr9:28022515-28022976 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 153 |
| Conread position: | 152-607 |
| Cow position: | chr9:59536808-59537271 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 152-611 |
| Cow position: | chr9:54925263-54925727 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 203 |
| Conread position: | 152-612 |
| Cow position: | chr9:10322515-10322982 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 150 |
| Conread position: | 152-613 |
| Cow position: | chr9:3543572-3544049 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 152-613 |
| Cow position: | chr9:17305266-17304795 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 152-613 |
| Cow position: | chr9:37162102-37161630 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 207 |
| Conread position: | 152-613 |
| Cow position: | chr9:37970485-37970025 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 203 |
| Conread position: | 152-613 |
| Cow position: | chr9:42310394-42310859 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 205 |
| Conread position: | 152-616 |
| Cow position: | chr9:1980983-1981455 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 218 |
| Conread position: | 152-618 |
| Cow position: | chr9:9013812-9014271 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 152-619 |
| Cow position: | chr9:6250011-6250486 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 152-619 |
| Cow position: | chr9:29027497-29027024 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 204 |
| Conread position: | 152-619 |
| Cow position: | chr9:51181474-51180989 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 397 |
| Conread position: | 152-631 |
| Cow position: | chr9:25633294-25632817 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 152-632 |
| Cow position: | chr9:7061371-7060881 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 150 |
| Conread position: | 152-634 |
| Cow position: | chr9:4533206-4533694 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 152-637 |
| Cow position: | chr9:32969661-32970161 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 152-658 |
| Cow position: | chr9:2498271-2497749 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 353 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 160, 42 |
| Conread position: | 152-684 |
| Cow position: | chr9:7003516-7004063 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 334 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 152-684 |
| Cow position: | chr9:43664513-43665042 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 153-503 |
| Cow position: | chr9:3148559-3148205 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 153-574 |
| Cow position: | chr9:28440520-28440948 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 153-608 |
| Cow position: | chr9:2211848-2212315 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 315 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 153-611 |
| Cow position: | chr9:780093-779641 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 153-611 |
| Cow position: | chr9:1251285-1250820 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 15, 212 |
| Conread position: | 153-611 |
| Cow position: | chr9:25903222-25903685 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 203 |
| Conread position: | 153-611 |
| Cow position: | chr9:31065431-31065897 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 139 |
| Conread position: | 153-611 |
| Cow position: | chr9:50791424-50791890 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 202 |
| Conread position: | 153-611 |
| Cow position: | chr9:51211392-51211861 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 200 |
| Conread position: | 153-611 |
| Cow position: | chr9:64015929-64015467 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 153-618 |
| Cow position: | chr9:5004686-5005155 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 153-618 |
| Cow position: | chr9:47002905-47003373 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 216 |
| Conread position: | 153-619 |
| Cow position: | chr9:28655066-28655537 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 314 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 195 |
| Conread position: | 153-626 |
| Cow position: | chr9:30673078-30673570 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 397 |
| Conread position: | 153-634 |
| Cow position: | chr9:29628038-29627555 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 221 |
| Conread position: | 154-527 |
| Cow position: | chr9:5515132-5515515 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 154-611 |
| Cow position: | chr9:59482080-59481616 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 169 |
| Conread position: | 155-590 |
| Cow position: | chr9:45874048-45874497 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 223 |
| Conread position: | 155-611 |
| Cow position: | chr9:17063675-17063206 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 226 |
| Conread position: | 155-611 |
| Cow position: | chr9:27935094-27935557 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 138 |
| Conread position: | 155-611 |
| Cow position: | chr9:28678684-28679152 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 200 |
| Conread position: | 155-612 |
| Cow position: | chr9:4943097-4942631 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 204 |
| Conread position: | 156-619 |
| Cow position: | chr9:13475071-13474590 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 158-596 |
| Cow position: | chr9:22431994-22432434 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 158-611 |
| Cow position: | chr9:221811-221343 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 331 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 10, 347 |
| Conread position: | 158-611 |
| Cow position: | chr9:3763720-3764179 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 314 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 166-491 |
| Cow position: | chr9:25034986-25034651 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 33, 189 |
| Conread position: | 166-500 |
| Cow position: | chr9:1075491-1075148 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 190 |
| Conread position: | 167-444 |
| Cow position: | chr9:25582481-25582191 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 278 |
| Conread position: | 167-619 |
| Cow position: | chr9:828408-827920 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 167-671 |
| Cow position: | chr9:651287-650787 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 171-401 |
| Cow position: | chr9:9824882-9825119 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 183 |
| Conread position: | 178-619 |
| Cow position: | chr9:3727340-3727786 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 91 |
| Conread position: | 182-535 |
| Cow position: | chr9:52292158-52292502 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 135, 22 |
| Conread position: | 184-619 |
| Cow position: | chr9:22654321-22654764 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 355 |
| Conread position: | 185-354 |
| Cow position: | chr9:20308398-20308227 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 185-372 |
| Cow position: | chr9:64119973-64120157 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 119, 68 |
| Conread position: | 185-382 |
| Cow position: | chr9:3566096-3565898 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 134, 164 |
| Conread position: | 185-453 |
| Cow position: | chr9:16629919-16629649 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 134, 164 |
| Conread position: | 185-558 |
| Cow position: | chr9:27035432-27035806 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 169 |
| Conread position: | 185-564 |
| Cow position: | chr9:8166132-8165754 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 164 |
| Conread position: | 185-608 |
| Cow position: | chr9:3804294-3804727 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 276 |
| Conread position: | 185-611 |
| Cow position: | chr9:4649844-4649432 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 92 |
| Conread position: | 185-611 |
| Cow position: | chr9:16176519-16176940 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 182 |
| Conread position: | 185-611 |
| Cow position: | chr9:18509063-18508642 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 140 |
| Conread position: | 185-613 |
| Cow position: | chr9:21410043-21410479 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 352 |
| Conread position: | 185-616 |
| Cow position: | chr9:2476508-2476923 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 128, 167 |
| Conread position: | 185-618 |
| Cow position: | chr9:2867234-2866787 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 133, 350 |
| Conread position: | 185-619 |
| Cow position: | chr9:6977087-6977519 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 113 |
| Conread position: | 185-619 |
| Cow position: | chr9:31808328-31808766 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 29 |
| Conread position: | 185-619 |
| Cow position: | chr9:60277265-60276830 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 169 |
| Conread position: | 185-620 |
| Cow position: | chr9:9646881-9647311 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 135, 69 |
| Conread position: | 185-620 |
| Cow position: | chr9:39731304-39730869 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 185-626 |
| Cow position: | chr9:44818909-44819337 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 37 |
| Conread position: | 185-630 |
| Cow position: | chr9:29329383-29329833 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 16, 163 |
| Conread position: | 185-683 |
| Cow position: | chr9:9329133-9328631 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 331 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 134, 81 |
| Conread position: | 186-582 |
| Cow position: | chr9:4978854-4979252 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 161, 110 |
| Conread position: | 186-608 |
| Cow position: | chr9:32296490-32296074 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 153, 80 |
| Conread position: | 186-613 |
| Cow position: | chr9:46271888-46272303 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 262, 116 |
| Conread position: | 187-607 |
| Cow position: | chr9:24981167-24980748 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 133, 67 |
| Conread position: | 187-638 |
| Cow position: | chr9:7016636-7017081 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 188-615 |
| Cow position: | chr9:30435323-30435762 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 190-611 |
| Cow position: | chr9:59427792-59428186 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 312, 23 |
| Conread position: | 193-527 |
| Cow position: | chr9:7091973-7092304 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 106 |
| Conread position: | 193-619 |
| Cow position: | chr9:50698064-50698487 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 196-585 |
| Cow position: | chr9:4282738-4283117 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 234, 18 |
| Conread position: | 198-314 |
| Cow position: | chr9:1637146-1637263 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 199-611 |
| Cow position: | chr9:22089289-22089691 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 107, 65 |
| Conread position: | 201-609 |
| Cow position: | chr9:3005485-3005065 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 295 |
| Conread position: | 213-613 |
| Cow position: | chr9:130411-129982 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 92 |
| Conread position: | 230-613 |
| Cow position: | chr9:27782979-27783370 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 137 |
| Conread position: | 258-611 |
| Cow position: | chr9:30827557-30827917 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 264-611 |
| Cow position: | chr9:46042387-46042053 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 287-619 |
| Cow position: | chr9:1995540-1995202 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 315-611 |
| Cow position: | chr9:2871211-2871506 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 60 |
| Conread position: | 327-563 |
| Cow position: | chr9:204555-204322 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 328-613 |
| Cow position: | chr9:19158645-19158357 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 337-611 |
| Cow position: | chr9:47042874-47043136 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 346-611 |
| Cow position: | chr9:5798883-5798617 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 369-619 |
| Cow position: | chr9:20939258-20939507 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 378-611 |
| Cow position: | chr9:46859518-46859282 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 383-619 |
| Cow position: | chr9:20308061-20307826 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 405-630 |
| Cow position: | chr9:59447318-59447540 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 137 |
Show alignments to all cow chromosomes.