Cow genome map

Conread name: Ss1.1-Pig4-TMW8032H19.3

Conread position: 1-139
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-149
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 63

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-151
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 23

Conread position: 1-159
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 156

Conread position: 1-159
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-159
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 44

Conread position: 1-159
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-160
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-204
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 163

Conread position: 1-206
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 165

Conread position: 2-139
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 99

Conread position: 2-149
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-149
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 2-151
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 2-156
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 156

Conread position: 2-205
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 172

Conread position: 2-206
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 79

Conread position: 2-206
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 161

Conread position: 3-176
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 93

Conread position: 4-149
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 108-611
Cow position:
Alignm length: 524
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 17

Conread position: 134-608
Cow position:
Alignm length: 491
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 85

Conread position: 135-619
Cow position:
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 139-616
Cow position:
Alignm length: 486
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 149-503
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 130

Conread position: 152-319
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 152-319
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 152-334
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 152-425
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 23

Conread position: 152-445
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 152-446
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 38

Conread position: 152-467
Cow position:
Alignm length: 329
Alignm identity: 221
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 17

Conread position: 152-476
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 148

Conread position: 152-590
Cow position:
Alignm length: 474
Alignm identity: 312
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 359

Conread position: 152-606
Cow position:
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 153

Conread position: 152-607
Cow position:
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 7

Conread position: 152-611
Cow position:
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 203

Conread position: 152-612
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 150

Conread position: 152-613
Cow position:
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 152-613
Cow position:
Alignm length: 480
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 152-613
Cow position:
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 152-613
Cow position:
Alignm length: 478
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 203

Conread position: 152-613
Cow position:
Alignm length: 475
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 205

Conread position: 152-616
Cow position:
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 218

Conread position: 152-618
Cow position:
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 152-619
Cow position:
Alignm length: 486
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 113

Conread position: 152-619
Cow position:
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 204

Conread position: 152-619
Cow position:
Alignm length: 490
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 397

Conread position: 152-631
Cow position:
Alignm length: 500
Alignm identity: 332
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 91

Conread position: 152-632
Cow position:
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 150

Conread position: 152-634
Cow position:
Alignm length: 498
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 152-637
Cow position:
Alignm length: 511
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 152-658
Cow position:
Alignm length: 538
Alignm identity: 353
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 160, 42

Conread position: 152-684
Cow position:
Alignm length: 557
Alignm identity: 334
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 60

Conread position: 152-684
Cow position:
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 153-503
Cow position:
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-574
Cow position:
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-608
Cow position:
Alignm length: 476
Alignm identity: 315
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 15, 73

Conread position: 153-611
Cow position:
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 153-611
Cow position:
Alignm length: 482
Alignm identity: 313
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 15, 212

Conread position: 153-611
Cow position:
Alignm length: 477
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 203

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 153-611
Cow position:
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 153-611
Cow position:
Alignm length: 477
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 200

Conread position: 153-611
Cow position:
Alignm length: 476
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 135

Conread position: 153-618
Cow position:
Alignm length: 482
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 62

Conread position: 153-618
Cow position:
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 216

Conread position: 153-619
Cow position:
Alignm length: 482
Alignm identity: 314
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 195

Conread position: 153-626
Cow position:
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 397

Conread position: 153-634
Cow position:
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 221

Conread position: 154-527
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 154-611
Cow position:
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 169

Conread position: 155-590
Cow position:
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 223

Conread position: 155-611
Cow position:
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 226

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 138

Conread position: 155-611
Cow position:
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 155-612
Cow position:
Alignm length: 480
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 204

Conread position: 156-619
Cow position:
Alignm length: 496
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 93

Conread position: 158-596
Cow position:
Alignm length: 452
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 158-611
Cow position:
Alignm length: 483
Alignm identity: 331
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 347

Conread position: 158-611
Cow position:
Alignm length: 474
Alignm identity: 314
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 6, 56

Conread position: 166-491
Cow position:
Alignm length: 339
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 189

Conread position: 166-500
Cow position:
Alignm length: 348
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 190

Conread position: 167-444
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 278

Conread position: 167-619
Cow position:
Alignm length: 495
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 110

Conread position: 167-671
Cow position:
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 171-401
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 183

Conread position: 178-619
Cow position:
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 91

Conread position: 182-535
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 135, 22

Conread position: 184-619
Cow position:
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 355

Conread position: 185-354
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 185-372
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 119, 68

Conread position: 185-382
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 134, 164

Conread position: 185-453
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 134, 164

Conread position: 185-558
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 169

Conread position: 185-564
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 185-608
Cow position:
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 276

Conread position: 185-611
Cow position:
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 92

Conread position: 185-611
Cow position:
Alignm length: 435
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 182

Conread position: 185-611
Cow position:
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 140

Conread position: 185-613
Cow position:
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 352

Conread position: 185-616
Cow position:
Alignm length: 442
Alignm identity: 294
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 128, 167

Conread position: 185-618
Cow position:
Alignm length: 456
Alignm identity: 302
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 133, 350

Conread position: 185-619
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 113

Conread position: 185-619
Cow position:
Alignm length: 448
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 29

Conread position: 185-619
Cow position:
Alignm length: 448
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 169

Conread position: 185-620
Cow position:
Alignm length: 448
Alignm identity: 289
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 135, 69

Conread position: 185-620
Cow position:
Alignm length: 450
Alignm identity: 290
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 63

Conread position: 185-626
Cow position:
Alignm length: 449
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 37

Conread position: 185-630
Cow position:
Alignm length: 458
Alignm identity: 299
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 163

Conread position: 185-683
Cow position:
Alignm length: 521
Alignm identity: 331
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 134, 81

Conread position: 186-582
Cow position:
Alignm length: 409
Alignm identity: 256
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 161, 110

Conread position: 186-608
Cow position:
Alignm length: 434
Alignm identity: 297
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 153, 80

Conread position: 186-613
Cow position:
Alignm length: 435
Alignm identity: 275
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 262, 116

Conread position: 187-607
Cow position:
Alignm length: 434
Alignm identity: 279
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 67

Conread position: 187-638
Cow position:
Alignm length: 463
Alignm identity: 297
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 24

Conread position: 188-615
Cow position:
Alignm length: 448
Alignm identity: 299
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 16

Conread position: 190-611
Cow position:
Alignm length: 424
Alignm identity: 286
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 312, 23

Conread position: 193-527
Cow position:
Alignm length: 342
Alignm identity: 219
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 106

Conread position: 193-619
Cow position:
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 19

Conread position: 196-585
Cow position:
Alignm length: 395
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 234, 18

Conread position: 198-314
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 199-611
Cow position:
Alignm length: 420
Alignm identity: 271
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 65

Conread position: 201-609
Cow position:
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 295

Conread position: 213-613
Cow position:
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 92

Conread position: 230-613
Cow position:
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 137

Conread position: 258-611
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 96

Conread position: 264-611
Cow position:
Alignm length: 357
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 32

Conread position: 287-619
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 77

Conread position: 315-611
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 60

Conread position: 327-563
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 20

Conread position: 328-613
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 39

Conread position: 337-611
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 10, 30

Conread position: 346-611
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 89, 27

Conread position: 369-619
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 20

Conread position: 378-611
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 67

Conread position: 383-619
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 66

Conread position: 405-630
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 137

Show alignments to all cow chromosomes.