Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               45, 202
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               1-413
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 144
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 154
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               337
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               337
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               43, 488
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 232
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               338
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 155
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 155
               

               Conread position:
               1-497
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 473
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               4-481
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               344
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 149
               

               Conread position:
               4-482
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               331
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               6-298
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               6-465
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               343
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               37, 143
               

               Conread position:
               7-402
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               243, 84
               

               Conread position:
               7-429
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               41, 119
               

               Conread position:
               7-481
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 98
               

               Conread position:
               9-427
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 124
               

               Conread position:
               10-482
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               22-266
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               22-373
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               22-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 6
               

               Conread position:
               25-455
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               318
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               26-480
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               23, 163
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 199
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               323
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               65, 382
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 179
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 163
               

               Conread position:
               28-484
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               31-453
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               34-304
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               55-279
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               29, 226
               

               Conread position:
               74-473
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               278
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               177, 20
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               92-466
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               164, 36
               

               Conread position:
               93-429
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               93-464
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               293, 20
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               158, 22
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 194
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 35
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               157, 27
               

               Conread position:
               94-482
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 25
               

               Conread position:
               94-482
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 26
               

               Conread position:
               95-440
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 16
               

               Conread position:
               98-279
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               102-484
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               106-484
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 109
               

               Conread position:
               136-482
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               145-410
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               154-467
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               155, 16
               

               Conread position:
               154-481
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 195
               

               Conread position:
               156-453
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 271
               

               Conread position:
               156-482
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               101, 343
               

               Conread position:
               190-410
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               195-486
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 188
               

               Conread position:
               208-484
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               213-483
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               228-482
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               253-467
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               311-481
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               312-489
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               77, 114
               

               Conread position:
               318-470
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 0
               
Show alignments to all cow chromosomes.