Cow genome map

Conread name: Ss1.1-Pig4-TMW8032J18.3

Conread position: 1-235
Cow position: chr10:58596237-58596485 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 202

Conread position: 1-378
Cow position: chr10:60489402-60489803 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 130

Conread position: 1-413
Cow position: chr10:32063885-32064333 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 302
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 144

Conread position: 1-476
Cow position: chr10:29695980-29696483 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 154

Conread position: 1-482
Cow position: chr10:14859717-14860220 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 337
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 17, 26

Conread position: 1-482
Cow position: chr10:21400934-21400417 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 337
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 43, 488

Conread position: 1-482
Cow position: chr10:25498088-25498606 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 133

Conread position: 1-482
Cow position: chr10:34685629-34686147 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 232

Conread position: 1-482
Cow position: chr10:39179526-39180037 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 338
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 92, 26

Conread position: 1-482
Cow position: chr10:41157189-41157701 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 331
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 155

Conread position: 1-482
Cow position: chr10:62216340-62216860 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1-484
Cow position: chr10:21076096-21076612 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 155

Conread position: 1-497
Cow position: chr10:25565506-25564988 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 473

Conread position: 2-482
Cow position: chr10:32650475-32650987 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 41

Conread position: 4-481
Cow position: chr10:24299111-24298601 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 344
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 149

Conread position: 4-482
Cow position: chr10:124054-124564 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 331
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 89, 39

Conread position: 6-298
Cow position: chr10:42747841-42748149 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 118

Conread position: 6-465
Cow position: chr10:42109471-42109964 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 343
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 143

Conread position: 7-402
Cow position: chr10:4499455-4499855 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 243, 84

Conread position: 7-429
Cow position: chr10:42663974-42664396 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 41, 119

Conread position: 7-481
Cow position: chr10:41352006-41351510 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 9-427
Cow position: chr10:38847115-38847557 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 124

Conread position: 10-482
Cow position: chr10:39817599-39817109 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 22-266
Cow position: chr10:64303211-64302949 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 22-373
Cow position: chr10:39881506-39881115 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 64, 15

Conread position: 22-482
Cow position: chr10:24978368-24977885 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 25-455
Cow position: chr10:4192449-4192006 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 290
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 121

Conread position: 25-482
Cow position: chr10:47906544-47907032 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 318
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 21, 105

Conread position: 26-480
Cow position: chr10:62409087-62408605 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 327
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 163

Conread position: 28-482
Cow position: chr10:1375303-1375787 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 199

Conread position: 28-482
Cow position: chr10:19143571-19143084 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 323
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 382

Conread position: 28-482
Cow position: chr10:21486683-21487169 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 326
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 176

Conread position: 28-482
Cow position: chr10:22101008-22101484 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 179

Conread position: 28-482
Cow position: chr10:25359166-25359653 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 163

Conread position: 28-484
Cow position: chr10:29633092-29632607 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 322
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 103

Conread position: 31-453
Cow position: chr10:276364-276814 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 31-482
Cow position: chr10:62778113-62778601 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 34-304
Cow position: chr10:20383768-20383485 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 88

Conread position: 55-279
Cow position: chr10:21518537-21518305 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 226

Conread position: 74-473
Cow position: chr10:38538668-38538252 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 278
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 177, 20

Conread position: 78-482
Cow position: chr10:14803664-14804090 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 16

Conread position: 78-482
Cow position: chr10:32578133-32578543 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 272
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 16

Conread position: 92-466
Cow position: chr10:63841156-63841541 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 164, 36

Conread position: 93-429
Cow position: chr10:14928492-14928829 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 80

Conread position: 93-464
Cow position: chr10:20396617-20396953 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 293, 20

Conread position: 93-482
Cow position: chr10:11685820-11685417 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 158, 22

Conread position: 93-482
Cow position: chr10:13366009-13365616 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 194

Conread position: 93-482
Cow position: chr10:38345519-38345108 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 93-482
Cow position: chr10:46191218-46191612 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 35

Conread position: 93-482
Cow position: chr10:51952758-51952368 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 157, 27

Conread position: 94-482
Cow position: chr10:184110-184528 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 25

Conread position: 94-482
Cow position: chr10:24313980-24313582 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 26

Conread position: 95-440
Cow position: chr10:28116577-28116225 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 16

Conread position: 98-279
Cow position: chr10:31537177-31537361 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 102-484
Cow position: chr10:6260912-6260541 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 155

Conread position: 106-484
Cow position: chr10:15862278-15861881 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 109

Conread position: 136-482
Cow position: chr10:39854126-39853756 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 145-410
Cow position: chr10:66176003-66175727 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 15

Conread position: 154-467
Cow position: chr10:38526833-38527145 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 155, 16

Conread position: 154-481
Cow position: chr10:46694469-46694123 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 195

Conread position: 156-453
Cow position: chr10:58377682-58377369 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 271

Conread position: 156-482
Cow position: chr10:16925443-16925789 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 343

Conread position: 190-410
Cow position: chr10:14951836-14952059 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 67

Conread position: 195-486
Cow position: chr10:40152498-40152197 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 188

Conread position: 208-484
Cow position: chr10:40751612-40751903 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 25

Conread position: 213-483
Cow position: chr10:11820299-11820586 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 17

Conread position: 228-482
Cow position: chr10:10415396-10415652 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 31

Conread position: 253-467
Cow position: chr10:20371955-20371735 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 13

Conread position: 311-481
Cow position: chr10:33346683-33346853 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 7

Conread position: 312-489
Cow position: chr10:23431892-23432073 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 114

Conread position: 318-470
Cow position: chr10:8328184-8328027 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.