Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               1-381
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 200
               

               Conread position:
               1-407
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               29, 139
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               337
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               29, 228
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-481
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               334
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 196
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               348
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               45, 201
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 481
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               355
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 190
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 252
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               346
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 193
               

               Conread position:
               2-476
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               6-281
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               6-482
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               338
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               27, 384
               

               Conread position:
               7-464
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               9-477
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               333
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 381
               

               Conread position:
               15-382
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               20-482
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               330
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               10, 209
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               311
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               322
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               321
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               21, 198
               

               Conread position:
               28-203
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               90, 109
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               320
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               319
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               21, 424
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               309
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               21, 372
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 463
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               31-470
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               31-475
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 191
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               329
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               18, 159
               

               Conread position:
               37-488
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 91
               

               Conread position:
               74-471
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               74-471
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               115, 11
               

               Conread position:
               75-480
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 8
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               278
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               84-383
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               93-279
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               101, 113
               

               Conread position:
               93-454
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               94-482
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               116-281
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               130-390
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               119, 250
               

               Conread position:
               136-482
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               136-488
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 41
               

               Conread position:
               137-452
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               167, 68
               

               Conread position:
               144-307
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               145-445
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               145-445
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               147-482
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               168-482
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               88, 218
               

               Conread position:
               191-481
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               192-408
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               91, 63
               

               Conread position:
               207-478
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               207-482
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 268
               

               Conread position:
               290-470
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               311-482
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               79, 143
               

               Conread position:
               311-484
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               77, 132
               

               Conread position:
               312-489
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               74, 89
               

               Conread position:
               319-486
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               326-473
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 126
               
Show alignments to all cow chromosomes.