Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
| Conread position: | 1-482 |
| Cow position: | chr12:21426361-21426873 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 1-485 |
| Cow position: | chr12:8310842-8311363 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 362 |
| Conread position: | 7-450 |
| Cow position: | chr12:16326402-16326845 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 7-464 |
| Cow position: | chr12:14693328-14693792 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 7-467 |
| Cow position: | chr12:21499790-21500273 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 328 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 84, 271 |
| Conread position: | 10-466 |
| Cow position: | chr12:8982734-8982261 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 45 |
| Conread position: | 19-480 |
| Cow position: | chr12:22332304-22332801 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 12 |
| Conread position: | 20-476 |
| Cow position: | chr12:21941461-21941937 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 20-500 |
| Cow position: | chr12:6406965-6406451 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 342 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 210 |
| Conread position: | 25-451 |
| Cow position: | chr12:26141502-26141962 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-467 |
| Cow position: | chr12:3360605-3361068 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 18, 449 |
| Conread position: | 28-481 |
| Cow position: | chr12:21901648-21902115 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 28-482 |
| Cow position: | chr12:11097933-11098422 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 21, 125 |
| Conread position: | 28-482 |
| Cow position: | chr12:42860123-42859648 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 161 |
| Conread position: | 31-281 |
| Cow position: | chr12:22026452-22026712 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 31-453 |
| Cow position: | chr12:347531-347979 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 93-471 |
| Cow position: | chr12:21254887-21254486 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 93-480 |
| Cow position: | chr12:17975322-17975715 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 41 |
| Conread position: | 93-481 |
| Cow position: | chr12:21207466-21207871 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 158, 25 |
| Conread position: | 93-482 |
| Cow position: | chr12:25101290-25100882 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 160, 20 |
| Conread position: | 93-489 |
| Cow position: | chr12:14662842-14662447 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 49, 195 |
| Conread position: | 94-482 |
| Cow position: | chr12:28766247-28765840 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 277 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 95-482 |
| Cow position: | chr12:252286-251879 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 96-482 |
| Cow position: | chr12:45261386-45261802 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 299 |
| Conread position: | 150-466 |
| Cow position: | chr12:3632427-3632102 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 100, 218 |
| Conread position: | 220-410 |
| Cow position: | chr12:23163501-23163311 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 13 |
Show alignments to all cow chromosomes.