Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
| Conread position: | 1-303 |
| Cow position: | chr13:46732907-46732591 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 1-429 |
| Cow position: | chr13:33928114-33927665 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 303 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 81, 124 |
| Conread position: | 1-473 |
| Cow position: | chr13:30140430-30140944 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 204 |
| Conread position: | 1-476 |
| Cow position: | chr13:34936577-34937099 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 339 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 1-482 |
| Cow position: | chr13:31832045-31832558 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 1-482 |
| Cow position: | chr13:34911927-34911421 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 341 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 17, 121 |
| Conread position: | 1-482 |
| Cow position: | chr13:62328142-62327626 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 2-203 |
| Cow position: | chr13:32525298-32525085 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 2-280 |
| Cow position: | chr13:60704083-60703794 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 35, 113 |
| Conread position: | 2-482 |
| Cow position: | chr13:22186277-22185781 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 2-484 |
| Cow position: | chr13:3276597-3277114 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 6-488 |
| Cow position: | chr13:60701824-60701334 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 7-282 |
| Cow position: | chr13:3338291-3338582 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 40, 267 |
| Conread position: | 25-476 |
| Cow position: | chr13:2389326-2388866 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 25-482 |
| Cow position: | chr13:21840726-21840236 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 325 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 25-488 |
| Cow position: | chr13:32986578-32986093 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 68, 104 |
| Conread position: | 28-406 |
| Cow position: | chr13:30302543-30302946 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 175 |
| Conread position: | 28-482 |
| Cow position: | chr13:1593684-1593197 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-482 |
| Cow position: | chr13:4940557-4941046 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-482 |
| Cow position: | chr13:15521043-15520557 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 28-482 |
| Cow position: | chr13:30657490-30657018 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 28-482 |
| Cow position: | chr13:34326205-34325717 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 28-484 |
| Cow position: | chr13:34187217-34186727 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 480 |
| Conread position: | 28-493 |
| Cow position: | chr13:34692634-34693134 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 31-277 |
| Cow position: | chr13:47859929-47860183 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 31-479 |
| Cow position: | chr13:34143183-34142704 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 16, 256 |
| Conread position: | 32-482 |
| Cow position: | chr13:33825252-33824777 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 43-489 |
| Cow position: | chr13:31560680-31561153 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 65-479 |
| Cow position: | chr13:56730764-56730332 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 93-479 |
| Cow position: | chr13:2306051-2306448 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 93-482 |
| Cow position: | chr13:9044058-9044459 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 93-482 |
| Cow position: | chr13:13324305-13324707 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 173, 22 |
| Conread position: | 93-482 |
| Cow position: | chr13:34042817-34042411 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 297 |
| Conread position: | 93-494 |
| Cow position: | chr13:19438499-19438904 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 156, 30 |
| Conread position: | 95-482 |
| Cow position: | chr13:23003966-23003558 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 306 |
| Conread position: | 96-479 |
| Cow position: | chr13:21130879-21131274 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 108-454 |
| Cow position: | chr13:2583737-2583376 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 198-476 |
| Cow position: | chr13:34767621-34767334 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 312-482 |
| Cow position: | chr13:4178864-4178693 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.