Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               1-305
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 5
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               301
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               41, 143
               

               Conread position:
               1-468
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 424
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               322
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               81, 59
               

               Conread position:
               1-480
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 234
               

               Conread position:
               1-481
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 252
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               337
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               345
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               343
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               45, 150
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 201
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 219
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               341
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 281
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               341
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               345
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 130
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 229
               

               Conread position:
               2-488
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               3-427
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 127
               

               Conread position:
               4-470
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               313
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               4-476
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               332
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               23, 179
               

               Conread position:
               4-482
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               333
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 26
               

               Conread position:
               4-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               305
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               22, 275
               

               Conread position:
               7-281
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               7-376
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               7-429
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 246
               

               Conread position:
               7-482
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               7-482
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               328
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               39, 114
               

               Conread position:
               7-493
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               341
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               9-281
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 153
               

               Conread position:
               10-464
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               324
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               35, 240
               

               Conread position:
               15-480
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 239
               

               Conread position:
               22-470
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               23-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               24-484
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               25-292
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 230
               

               Conread position:
               25-476
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 277
               

               Conread position:
               26-484
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               324
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               27-390
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               28-409
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 103
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               313
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               21, 121
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               316
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               328
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               321
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               21, 247
               

               Conread position:
               28-488
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               31-467
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 95
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 176
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               31-493
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               31-497
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               333
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 454
               

               Conread position:
               50-482
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 150
               

               Conread position:
               74-481
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               91-489
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 114
               

               Conread position:
               93-418
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-467
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               93-475
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               93-476
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               29, 351
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               147, 119
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               279
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               47, 319
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               94-270
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               94-484
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               139, 30
               

               Conread position:
               96-484
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               98-453
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               31, 326
               

               Conread position:
               105-482
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 71
               

               Conread position:
               109-482
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               136-479
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               155-482
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               96, 193
               

               Conread position:
               159-298
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               159-482
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               161-482
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               178-476
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               181-484
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               214-481
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 210
               

               Conread position:
               242-464
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 133
               

               Conread position:
               256-482
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               279-482
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               318-482
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 106
               

               Conread position:
               324-482
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 149
               
Show alignments to all cow chromosomes.