Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               32, 202
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               97, 21
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 115
               

               Conread position:
               1-481
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               325
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 474
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 300
               

               Conread position:
               1-483
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               339
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 225
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               50, 363
               

               Conread position:
               4-389
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               4-470
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               342
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               14, 140
               

               Conread position:
               7-279
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 121
               

               Conread position:
               7-315
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               39, 211
               

               Conread position:
               9-396
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               9-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               312
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               10-488
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               11-310
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 187
               

               Conread position:
               13-487
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               23-482
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               327
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               23-484
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               25-470
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               25-483
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               305
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               21, 203
               

               Conread position:
               27-403
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 191
               

               Conread position:
               28-480
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               324
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 199
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               322
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               21, 195
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               322
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               21, 382
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               325
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               18, 212
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               310
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-486
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               31-280
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               13, 189
               

               Conread position:
               31-372
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               15, 231
               

               Conread position:
               31-384
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 197
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 329
               

               Conread position:
               37-482
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 81
               

               Conread position:
               43-482
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 52
               

               Conread position:
               61-476
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               73-482
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               176, 21
               

               Conread position:
               74-482
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               144, 20
               

               Conread position:
               74-482
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               293
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               78-489
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               93-310
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               93-481
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               49, 132
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 135
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               94-361
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               26, 164
               

               Conread position:
               94-466
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               191, 17
               

               Conread position:
               94-484
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               94-489
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 40
               

               Conread position:
               109-482
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 27
               

               Conread position:
               109-482
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               138-482
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               175-484
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               74, 316
               

               Conread position:
               207-482
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               312-488
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               84, 111
               

               Conread position:
               324-488
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               
Show alignments to all cow chromosomes.