Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 150
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 233
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               339
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 211
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               338
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               1-493
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 127
               

               Conread position:
               2-488
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               6-483
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               7-279
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               43, 112
               

               Conread position:
               7-478
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               338
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 88
               

               Conread position:
               7-481
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 131
               

               Conread position:
               7-482
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 268
               

               Conread position:
               10-482
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 217
               

               Conread position:
               19-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 207
               

               Conread position:
               19-458
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 78
               

               Conread position:
               23-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 166
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               326
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 462
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               322
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               28-484
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               328
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               28-489
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               31-458
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               311
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               31-476
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               318
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 196
               

               Conread position:
               73-482
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               129, 21
               

               Conread position:
               81-470
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 377
               

               Conread position:
               91-484
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               159, 12
               

               Conread position:
               93-467
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               162, 119
               

               Conread position:
               93-481
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               279
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 382
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               95-415
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               102-281
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               35, 370
               

               Conread position:
               159-484
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 98
               

               Conread position:
               161-480
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               177-410
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 112
               

               Conread position:
               209-480
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               23, 251
               

               Conread position:
               312-476
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               312-492
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               312-493
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               77, 35
               

               Conread position:
               326-482
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               334-482
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.