Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
| Conread position: | 1-281 |
| Cow position: | chr19:31341476-31341765 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 1-285 |
| Cow position: | chr19:4252601-4252296 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 17, 293 |
| Conread position: | 1-367 |
| Cow position: | chr19:29209323-29209721 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-377 |
| Cow position: | chr19:32183688-32183290 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 151 |
| Conread position: | 1-449 |
| Cow position: | chr19:7405674-7405231 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 1-482 |
| Cow position: | chr19:772366-772877 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 336 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 1-482 |
| Cow position: | chr19:32202514-32203017 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 180 |
| Conread position: | 1-482 |
| Cow position: | chr19:32212304-32211795 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 301 |
| Conread position: | 2-464 |
| Cow position: | chr19:1031871-1032335 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 8-471 |
| Cow position: | chr19:35979032-35979530 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 175 |
| Conread position: | 22-408 |
| Cow position: | chr19:20125409-20125808 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 22-482 |
| Cow position: | chr19:416437-416939 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 335 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 26, 275 |
| Conread position: | 23-483 |
| Cow position: | chr19:20111434-20110977 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 327 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 25-482 |
| Cow position: | chr19:171998-172489 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 317 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 28-482 |
| Cow position: | chr19:893812-893337 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 314 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 72, 354 |
| Conread position: | 28-482 |
| Cow position: | chr19:7488103-7488591 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 183 |
| Conread position: | 28-482 |
| Cow position: | chr19:10672516-10672028 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-482 |
| Cow position: | chr19:33941402-33941888 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 365 |
| Conread position: | 28-482 |
| Cow position: | chr19:39390312-39390786 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 28-482 |
| Cow position: | chr19:40852640-40852160 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 31-246 |
| Cow position: | chr19:17018322-17018537 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 82, 18 |
| Conread position: | 31-482 |
| Cow position: | chr19:76440-75991 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 303 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 31-482 |
| Cow position: | chr19:32665327-32665803 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 321 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 33-440 |
| Cow position: | chr19:30372079-30372510 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 58, 363 |
| Conread position: | 33-482 |
| Cow position: | chr19:203761-204239 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 39-482 |
| Cow position: | chr19:15953664-15954115 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 44-458 |
| Cow position: | chr19:30754984-30755434 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 356 |
| Conread position: | 93-421 |
| Cow position: | chr19:55078613-55078963 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 93-426 |
| Cow position: | chr19:378005-377680 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 270, 66 |
| Conread position: | 93-482 |
| Cow position: | chr19:32244547-32244962 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 386 |
| Conread position: | 93-482 |
| Cow position: | chr19:42248682-42249082 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 93-484 |
| Cow position: | chr19:40887776-40887376 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 94-482 |
| Cow position: | chr19:42299628-42299218 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 97-288 |
| Cow position: | chr19:536748-536938 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 63 |
| Conread position: | 103-482 |
| Cow position: | chr19:33873304-33873704 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 106-482 |
| Cow position: | chr19:7450119-7449747 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 10 |
| Conread position: | 136-471 |
| Cow position: | chr19:6553525-6553869 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 114, 77 |
| Conread position: | 136-482 |
| Cow position: | chr19:350371-350013 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 146-384 |
| Cow position: | chr19:39683757-39683993 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 104, 156 |
| Conread position: | 159-384 |
| Cow position: | chr19:18728792-18729029 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 71 |
| Conread position: | 250-467 |
| Cow position: | chr19:352944-352730 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 145, 32 |
| Conread position: | 289-482 |
| Cow position: | chr19:42649028-42648834 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 311-482 |
| Cow position: | chr19:52151725-52151552 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 144 |
| Conread position: | 312-466 |
| Cow position: | chr19:17018572-17018721 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 12 |
Show alignments to all cow chromosomes.