Cow genome map

Conread name: Ss1.1-Pig4-TMW8032J18.3

Conread position: 1-203
Cow position: chr2:45969269-45969078 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 1-370
Cow position: chr2:41149257-41149650 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 254
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 100

Conread position: 1-376
Cow position: chr2:38372047-38372444 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 291

Conread position: 1-409
Cow position: chr2:20921580-20921141 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 1-456
Cow position: chr2:26865340-26864862 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 315
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 476

Conread position: 1-465
Cow position: chr2:52174113-52173623 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 396

Conread position: 1-471
Cow position: chr2:52152653-52152154 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 233

Conread position: 1-476
Cow position: chr2:82166816-82167323 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 333
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 1-478
Cow position: chr2:6772963-6772454 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 352
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 17, 82

Conread position: 1-482
Cow position: chr2:2413594-2413076 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 334
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 26, 489

Conread position: 1-482
Cow position: chr2:10844137-10843630 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 153

Conread position: 1-482
Cow position: chr2:44935871-44935367 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 1-482
Cow position: chr2:85356568-85356051 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 1-483
Cow position: chr2:5871130-5870633 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 336
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 134

Conread position: 1-484
Cow position: chr2:3749110-3749638 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 125

Conread position: 1-488
Cow position: chr2:36991093-36991614 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 402

Conread position: 1-488
Cow position: chr2:44345914-44346442 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 2-469
Cow position: chr2:43958833-43959313 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 2-473
Cow position: chr2:47810224-47810722 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 326
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 41

Conread position: 2-476
Cow position: chr2:2102253-2101756 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 118

Conread position: 2-482
Cow position: chr2:10712210-10711716 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 92

Conread position: 2-482
Cow position: chr2:41171897-41172398 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 41

Conread position: 3-476
Cow position: chr2:67430274-67430758 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 6-482
Cow position: chr2:77207876-77208363 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 120

Conread position: 6-487
Cow position: chr2:20903919-20903431 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 324
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 136

Conread position: 6-487
Cow position: chr2:78741344-78741858 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 330
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 51

Conread position: 7-375
Cow position: chr2:782524-782140 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 261
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 177

Conread position: 7-469
Cow position: chr2:5864877-5864407 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 310
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 111

Conread position: 7-475
Cow position: chr2:4235390-4235875 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 50

Conread position: 7-476
Cow position: chr2:202439-201951 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 331
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 197

Conread position: 7-484
Cow position: chr2:769177-768666 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 351
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 125

Conread position: 11-416
Cow position: chr2:75676656-75676250 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 156

Conread position: 11-481
Cow position: chr2:11691416-11691901 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 119

Conread position: 17-245
Cow position: chr2:37790922-37790689 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 74, 20

Conread position: 17-403
Cow position: chr2:38589405-38589797 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 119

Conread position: 18-472
Cow position: chr2:35352606-35353077 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 308
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 27, 13

Conread position: 22-481
Cow position: chr2:52061895-52062386 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 324
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 8, 104

Conread position: 22-482
Cow position: chr2:45921994-45921539 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 6

Conread position: 23-433
Cow position: chr2:32458779-32458338 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 416

Conread position: 23-485
Cow position: chr2:63293345-63292845 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 339
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 205

Conread position: 24-482
Cow position: chr2:28746711-28747181 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 318
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 154

Conread position: 25-476
Cow position: chr2:52615701-52616187 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 316
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 463

Conread position: 25-482
Cow position: chr2:2185027-2184536 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 327
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 169

Conread position: 25-482
Cow position: chr2:39420825-39421298 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 306
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 105

Conread position: 25-482
Cow position: chr2:41685743-41686236 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 311
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 464

Conread position: 25-482
Cow position: chr2:49471477-49471967 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 326
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 68, 461

Conread position: 25-482
Cow position: chr2:52655703-52656186 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 323
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 21, 114

Conread position: 25-482
Cow position: chr2:57142457-57141966 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 326
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 467

Conread position: 25-482
Cow position: chr2:57334434-57334917 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 317
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 102

Conread position: 25-485
Cow position: chr2:54649568-54649099 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 143

Conread position: 26-482
Cow position: chr2:72922598-72922111 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 95

Conread position: 28-470
Cow position: chr2:44992047-44991573 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 311
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 28-482
Cow position: chr2:10269424-10268940 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 317
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 96

Conread position: 28-482
Cow position: chr2:11159894-11159407 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 327
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 125

Conread position: 28-482
Cow position: chr2:13046445-13045985 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 298
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 337

Conread position: 28-482
Cow position: chr2:42672151-42671668 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 314
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 21, 197

Conread position: 28-482
Cow position: chr2:53328984-53329466 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 31-388
Cow position: chr2:11725091-11725468 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 34

Conread position: 31-430
Cow position: chr2:3729970-3730394 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 185

Conread position: 31-476
Cow position: chr2:46945910-46946382 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 313
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 62, 12

Conread position: 31-482
Cow position: chr2:32654587-32655055 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 94

Conread position: 31-482
Cow position: chr2:50983992-50983509 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 325
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 216

Conread position: 31-482
Cow position: chr2:78761723-78762193 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 308
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 67

Conread position: 31-484
Cow position: chr2:14560433-14560909 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 303

Conread position: 31-489
Cow position: chr2:65939211-65938723 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 322
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 193

Conread position: 32-482
Cow position: chr2:16899482-16899969 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 321
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 43-482
Cow position: chr2:50321548-50322003 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 307
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 22

Conread position: 50-307
Cow position: chr2:3439647-3439918 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 190

Conread position: 59-281
Cow position: chr2:40245336-40245560 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 35

Conread position: 93-286
Cow position: chr2:46465901-46465705 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 46

Conread position: 93-475
Cow position: chr2:5905538-5905148 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 93-475
Cow position: chr2:34565617-34565216 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 280

Conread position: 93-476
Cow position: chr2:283383-282978 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 272
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 48

Conread position: 93-476
Cow position: chr2:7211015-7211414 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 269

Conread position: 93-482
Cow position: chr2:4405038-4404628 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 47, 382

Conread position: 93-484
Cow position: chr2:61130976-61130605 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 20

Conread position: 93-485
Cow position: chr2:56438410-56438008 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 10

Conread position: 94-414
Cow position: chr2:2357146-2356822 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 210
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 83

Conread position: 94-454
Cow position: chr2:20876303-20875947 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 53

Conread position: 94-482
Cow position: chr2:20874841-20874457 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 53

Conread position: 94-484
Cow position: chr2:50402584-50402988 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 94-488
Cow position: chr2:1673337-1672941 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 34, 15

Conread position: 97-458
Cow position: chr2:72109198-72108834 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 87

Conread position: 98-384
Cow position: chr2:11703473-11703764 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 17

Conread position: 101-430
Cow position: chr2:7901600-7901951 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 98

Conread position: 101-465
Cow position: chr2:15580664-15580283 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 28

Conread position: 102-470
Cow position: chr2:10730236-10729849 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 50

Conread position: 102-482
Cow position: chr2:36979699-36980095 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 269
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 70

Conread position: 105-482
Cow position: chr2:28643797-28643411 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 325

Conread position: 106-454
Cow position: chr2:46402932-46402575 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 92

Conread position: 107-482
Cow position: chr2:44106768-44106389 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 192, 67

Conread position: 109-483
Cow position: chr2:34475560-34475192 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 7

Conread position: 136-482
Cow position: chr2:212864-212500 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 115, 355

Conread position: 147-482
Cow position: chr2:290465-290113 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 345

Conread position: 159-472
Cow position: chr2:73191316-73191632 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 54

Conread position: 169-482
Cow position: chr2:3837593-3837290 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 38

Conread position: 174-444
Cow position: chr2:29029503-29029784 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 71

Conread position: 175-484
Cow position: chr2:36054239-36053930 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 112, 17

Conread position: 202-482
Cow position: chr2:45968909-45968637 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 70

Conread position: 209-484
Cow position: chr2:39621721-39622011 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 65

Conread position: 210-482
Cow position: chr2:14821938-14822221 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 69

Conread position: 228-476
Cow position: chr2:2363644-2363898 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 312-463
Cow position: chr2:80516620-80516773 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 74, 12

Conread position: 325-482
Cow position: chr2:59963667-59963509 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 11

Conread position: 333-482
Cow position: chr2:4926606-4926456 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.