Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 291
               

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 202
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               315
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               43, 476
               

               Conread position:
               1-465
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 396
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 233
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               333
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-478
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               352
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               334
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               26, 489
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 153
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               1-483
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               336
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 134
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 125
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 402
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-469
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               2-473
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               2-476
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 92
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 133
               

               Conread position:
               6-482
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               6-487
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               41, 136
               

               Conread position:
               6-487
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               7-375
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               39, 177
               

               Conread position:
               7-469
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 111
               

               Conread position:
               7-475
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               7-476
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               39, 197
               

               Conread position:
               7-484
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               351
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               11-416
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               29, 156
               

               Conread position:
               11-481
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               17-245
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               17-403
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 119
               

               Conread position:
               18-472
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               308
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               22-481
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               324
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               22-482
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 6
               

               Conread position:
               23-433
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 416
               

               Conread position:
               23-485
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               339
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 205
               

               Conread position:
               24-482
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               24, 154
               

               Conread position:
               25-476
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 463
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               327
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               21, 169
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               311
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               21, 464
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               326
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               68, 461
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               21, 467
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               25-485
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               26-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               28-470
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               327
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 337
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               314
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               21, 197
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               31-388
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               31-430
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 185
               

               Conread position:
               31-476
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               313
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 94
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               325
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 216
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               31-484
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 303
               

               Conread position:
               31-489
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               322
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               18, 193
               

               Conread position:
               32-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               43-482
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               307
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               50-307
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 190
               

               Conread position:
               59-281
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               93-286
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               93-475
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               93-475
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               44, 280
               

               Conread position:
               93-476
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               93-476
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 269
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               47, 382
               

               Conread position:
               93-484
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               93-485
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               94-414
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 83
               

               Conread position:
               94-454
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               94-482
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               94-484
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 128
               

               Conread position:
               94-488
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               97-458
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 87
               

               Conread position:
               98-384
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               101-430
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               101-465
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 28
               

               Conread position:
               102-470
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               102-482
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               105-482
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 325
               

               Conread position:
               106-454
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               107-482
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               192, 67
               

               Conread position:
               109-483
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 7
               

               Conread position:
               136-482
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               115, 355
               

               Conread position:
               147-482
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 345
               

               Conread position:
               159-472
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               169-482
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               174-444
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               175-484
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               202-482
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               209-484
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               210-482
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               228-476
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               312-463
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               325-482
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               7, 11
               

               Conread position:
               333-482
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.