Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
| Conread position: | 1-359 |
| Cow position: | chr20:7085855-7085469 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 1-402 |
| Cow position: | chr20:2676833-2677270 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 1-471 |
| Cow position: | chr20:31379157-31378662 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 1-482 |
| Cow position: | chr20:5483905-5484424 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 227 |
| Conread position: | 1-482 |
| Cow position: | chr20:19437678-19438182 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 1-482 |
| Cow position: | chr20:20905468-20904976 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 1-489 |
| Cow position: | chr20:24614263-24614777 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 347 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 3-488 |
| Cow position: | chr20:13435191-13434714 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 4-482 |
| Cow position: | chr20:15291764-15292245 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 328 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 7-281 |
| Cow position: | chr20:35973683-35973393 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 10-450 |
| Cow position: | chr20:13665458-13665007 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 25-482 |
| Cow position: | chr20:5560971-5560480 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 329 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 462 |
| Conread position: | 28-481 |
| Cow position: | chr20:25851243-25850757 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-482 |
| Cow position: | chr20:5534689-5535172 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 28-482 |
| Cow position: | chr20:7116723-7116234 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-484 |
| Cow position: | chr20:23469913-23469429 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 21, 430 |
| Conread position: | 28-489 |
| Cow position: | chr20:8313686-8313198 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 28-489 |
| Cow position: | chr20:21914073-21914570 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 330 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 31-284 |
| Cow position: | chr20:13758017-13758275 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 32-489 |
| Cow position: | chr20:27868948-27869439 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 37-482 |
| Cow position: | chr20:3252376-3251900 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 56, 183 |
| Conread position: | 40-482 |
| Cow position: | chr20:9954211-9953751 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 43-279 |
| Cow position: | chr20:22717924-22717681 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 74-439 |
| Cow position: | chr20:11679304-11678918 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 85-273 |
| Cow position: | chr20:8994000-8993811 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 93-297 |
| Cow position: | chr20:18328230-18328041 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 93-401 |
| Cow position: | chr20:2791518-2791199 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 179, 36 |
| Conread position: | 93-480 |
| Cow position: | chr20:28565776-28565363 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 93-482 |
| Cow position: | chr20:29948342-29948734 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 93-482 |
| Cow position: | chr20:35119398-35119805 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 94-482 |
| Cow position: | chr20:20755597-20755214 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 122 |
| Conread position: | 95-413 |
| Cow position: | chr20:24516862-24517197 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 97-472 |
| Cow position: | chr20:22206375-22206761 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 103-482 |
| Cow position: | chr20:8004389-8003991 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 36 |
| Conread position: | 117-476 |
| Cow position: | chr20:28476169-28476527 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 119-312 |
| Cow position: | chr20:10857678-10857488 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 137, 68 |
| Conread position: | 136-482 |
| Cow position: | chr20:822636-823002 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 115, 337 |
| Conread position: | 181-476 |
| Cow position: | chr20:3270618-3270932 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 311 |
| Conread position: | 191-482 |
| Cow position: | chr20:13680132-13679823 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 219-481 |
| Cow position: | chr20:10841289-10841012 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 312-482 |
| Cow position: | chr20:8993580-8993411 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 312-484 |
| Cow position: | chr20:3033125-3033298 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 313-472 |
| Cow position: | chr20:10856967-10856809 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 313-482 |
| Cow position: | chr20:3684420-3684253 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 318-484 |
| Cow position: | chr20:19367519-19367352 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 116 |
Show alignments to all cow chromosomes.