Cow genome map

Conread name: Ss1.1-Pig4-TMW8032J18.3

Conread position: 1-254
Cow position: chr21:4083483-4083752 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 196

Conread position: 1-297
Cow position: chr21:21517042-21517347 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 254

Conread position: 1-370
Cow position: chr21:3615126-3615534 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 82

Conread position: 1-409
Cow position: chr21:18692590-18692997 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 256, 42

Conread position: 1-482
Cow position: chr21:26638624-26638111 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 335
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 45, 226

Conread position: 2-471
Cow position: chr21:35596214-35596711 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 2-476
Cow position: chr21:4183376-4183866 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 324
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 28, 94

Conread position: 2-489
Cow position: chr21:31559814-31559295 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 434

Conread position: 3-383
Cow position: chr21:2716835-2716428 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 40

Conread position: 6-484
Cow position: chr21:6699722-6699226 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 7-467
Cow position: chr21:21947964-21947465 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 336
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 185

Conread position: 7-470
Cow position: chr21:26823377-26822891 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 335
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 61

Conread position: 9-279
Cow position: chr21:23860623-23860914 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 198

Conread position: 9-471
Cow position: chr21:36714478-36714973 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 233

Conread position: 15-402
Cow position: chr21:444979-445368 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 267
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 206

Conread position: 19-483
Cow position: chr21:47939334-47939826 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 332
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 219

Conread position: 22-411
Cow position: chr21:21031601-21032010 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 266
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 6

Conread position: 23-405
Cow position: chr21:34259351-34258953 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 197

Conread position: 23-482
Cow position: chr21:3426350-3426839 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 327
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 8

Conread position: 25-476
Cow position: chr21:2510518-2510999 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 315
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 105

Conread position: 25-486
Cow position: chr21:4222823-4222335 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 166

Conread position: 28-482
Cow position: chr21:145786-146276 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 330
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 466

Conread position: 28-482
Cow position: chr21:3778634-3779120 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 319
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 21, 181

Conread position: 28-482
Cow position: chr21:10566545-10567022 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 316
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 96

Conread position: 28-482
Cow position: chr21:10849946-10850433 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 315
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 466

Conread position: 28-482
Cow position: chr21:30561668-30562156 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 323
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 28-482
Cow position: chr21:34292885-34293370 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 108

Conread position: 28-482
Cow position: chr21:48115974-48116455 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 316
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 285

Conread position: 28-484
Cow position: chr21:30600049-30599570 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 314
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 99

Conread position: 31-461
Cow position: chr21:2530256-2529794 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 303
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 51, 159

Conread position: 31-471
Cow position: chr21:4076717-4077182 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 208

Conread position: 31-476
Cow position: chr21:1292302-1291843 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 96

Conread position: 31-482
Cow position: chr21:358885-359387 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 328
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 179

Conread position: 31-482
Cow position: chr21:2883865-2883394 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 303
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 88

Conread position: 33-482
Cow position: chr21:2789106-2788639 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 42

Conread position: 37-482
Cow position: chr21:13124119-13123652 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 316
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 103

Conread position: 45-479
Cow position: chr21:216193-216639 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 147

Conread position: 74-482
Cow position: chr21:4456754-4457180 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 288
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 20

Conread position: 93-281
Cow position: chr21:49294873-49295064 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 129

Conread position: 93-476
Cow position: chr21:2416182-2416573 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 40, 20

Conread position: 94-482
Cow position: chr21:993072-992675 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 89

Conread position: 99-484
Cow position: chr21:21914237-21914641 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 151, 14

Conread position: 106-482
Cow position: chr21:23811832-23812229 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 107-493
Cow position: chr21:23601157-23601556 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 77

Conread position: 140-482
Cow position: chr21:6339558-6339920 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 115, 333

Conread position: 145-484
Cow position: chr21:3194393-3194735 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 155, 68

Conread position: 156-447
Cow position: chr21:37147526-37147828 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 126, 114

Conread position: 194-489
Cow position: chr21:10762452-10762746 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 61, 166

Conread position: 197-473
Cow position: chr21:34054690-34054390 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 16

Conread position: 202-480
Cow position: chr21:21926648-21926360 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 85

Conread position: 249-497
Cow position: chr21:18820313-18820060 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 229

Conread position: 253-478
Cow position: chr21:4086915-4087152 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 126

Conread position: 258-482
Cow position: chr21:1191291-1191517 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 12

Conread position: 312-476
Cow position: chr21:3798188-3798023 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 312-482
Cow position: chr21:40271494-40271323 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.