Cow genome map
Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
Conread position: | 1-254 |
Cow position: | chr21:4083483-4083752 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 202 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 46, 196 |
Conread position: | 1-297 |
Cow position: | chr21:21517042-21517347 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 254 |
Conread position: | 1-370 |
Cow position: | chr21:3615126-3615534 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 279 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 17, 82 |
Conread position: | 1-409 |
Cow position: | chr21:18692590-18692997 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 287 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 256, 42 |
Conread position: | 1-482 |
Cow position: | chr21:26638624-26638111 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 335 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 45, 226 |
Conread position: | 2-471 |
Cow position: | chr21:35596214-35596711 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 23 |
Conread position: | 2-476 |
Cow position: | chr21:4183376-4183866 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 324 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 28, 94 |
Conread position: | 2-489 |
Cow position: | chr21:31559814-31559295 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 434 |
Conread position: | 3-383 |
Cow position: | chr21:2716835-2716428 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 278 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 75, 40 |
Conread position: | 6-484 |
Cow position: | chr21:6699722-6699226 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 153 |
Conread position: | 7-467 |
Cow position: | chr21:21947964-21947465 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 336 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 25, 185 |
Conread position: | 7-470 |
Cow position: | chr21:26823377-26822891 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 335 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 49, 61 |
Conread position: | 9-279 |
Cow position: | chr21:23860623-23860914 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 210 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 28, 198 |
Conread position: | 9-471 |
Cow position: | chr21:36714478-36714973 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 233 |
Conread position: | 15-402 |
Cow position: | chr21:444979-445368 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 267 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 29, 206 |
Conread position: | 19-483 |
Cow position: | chr21:47939334-47939826 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 332 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 23, 219 |
Conread position: | 22-411 |
Cow position: | chr21:21031601-21032010 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 266 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 19, 6 |
Conread position: | 23-405 |
Cow position: | chr21:34259351-34258953 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 267 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 23, 197 |
Conread position: | 23-482 |
Cow position: | chr21:3426350-3426839 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 327 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 25, 8 |
Conread position: | 25-476 |
Cow position: | chr21:2510518-2510999 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 315 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 21, 105 |
Conread position: | 25-486 |
Cow position: | chr21:4222823-4222335 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 166 |
Conread position: | 28-482 |
Cow position: | chr21:145786-146276 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 330 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 21, 466 |
Conread position: | 28-482 |
Cow position: | chr21:3778634-3779120 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 319 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 21, 181 |
Conread position: | 28-482 |
Cow position: | chr21:10566545-10567022 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 316 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 65, 96 |
Conread position: | 28-482 |
Cow position: | chr21:10849946-10850433 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 315 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 21, 466 |
Conread position: | 28-482 |
Cow position: | chr21:30561668-30562156 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 323 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 28-482 |
Cow position: | chr21:34292885-34293370 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 108 |
Conread position: | 28-482 |
Cow position: | chr21:48115974-48116455 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 316 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 21, 285 |
Conread position: | 28-484 |
Cow position: | chr21:30600049-30599570 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 314 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 21, 99 |
Conread position: | 31-461 |
Cow position: | chr21:2530256-2529794 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 303 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 51, 159 |
Conread position: | 31-471 |
Cow position: | chr21:4076717-4077182 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 310 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 15, 208 |
Conread position: | 31-476 |
Cow position: | chr21:1292302-1291843 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 96 |
Conread position: | 31-482 |
Cow position: | chr21:358885-359387 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 328 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 15, 179 |
Conread position: | 31-482 |
Cow position: | chr21:2883865-2883394 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 303 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 18, 88 |
Conread position: | 33-482 |
Cow position: | chr21:2789106-2788639 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 42 |
Conread position: | 37-482 |
Cow position: | chr21:13124119-13123652 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 316 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 51, 103 |
Conread position: | 45-479 |
Cow position: | chr21:216193-216639 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 147 |
Conread position: | 74-482 |
Cow position: | chr21:4456754-4457180 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 288 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 93-281 |
Cow position: | chr21:49294873-49295064 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 145 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 16, 129 |
Conread position: | 93-476 |
Cow position: | chr21:2416182-2416573 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 270 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 94-482 |
Cow position: | chr21:993072-992675 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 89 |
Conread position: | 99-484 |
Cow position: | chr21:21914237-21914641 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 278 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 151, 14 |
Conread position: | 106-482 |
Cow position: | chr21:23811832-23812229 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 260 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 107-493 |
Cow position: | chr21:23601157-23601556 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 77 |
Conread position: | 140-482 |
Cow position: | chr21:6339558-6339920 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 246 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 115, 333 |
Conread position: | 145-484 |
Cow position: | chr21:3194393-3194735 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 250 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 155, 68 |
Conread position: | 156-447 |
Cow position: | chr21:37147526-37147828 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 216 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 126, 114 |
Conread position: | 194-489 |
Cow position: | chr21:10762452-10762746 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 220 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 61, 166 |
Conread position: | 197-473 |
Cow position: | chr21:34054690-34054390 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 213 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 55, 16 |
Conread position: | 202-480 |
Cow position: | chr21:21926648-21926360 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 216 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 47, 85 |
Conread position: | 249-497 |
Cow position: | chr21:18820313-18820060 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 171 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 31, 229 |
Conread position: | 253-478 |
Cow position: | chr21:4086915-4087152 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 43, 126 |
Conread position: | 258-482 |
Cow position: | chr21:1191291-1191517 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 161 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 58, 12 |
Conread position: | 312-476 |
Cow position: | chr21:3798188-3798023 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 312-482 |
Cow position: | chr21:40271494-40271323 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.