Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
| Conread position: | 1-254 |
| Cow position: | chr23:19449683-19449956 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 1-476 |
| Cow position: | chr23:5875112-5874604 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 347 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 16, 133 |
| Conread position: | 1-482 |
| Cow position: | chr23:4276618-4277136 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 1-482 |
| Cow position: | chr23:5779426-5778906 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 234 |
| Conread position: | 1-482 |
| Cow position: | chr23:31446474-31446996 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 349 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 1-482 |
| Cow position: | chr23:34174848-34175360 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 216 |
| Conread position: | 1-484 |
| Cow position: | chr23:13508732-13509236 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 327 |
| Conread position: | 2-482 |
| Cow position: | chr23:15220232-15219710 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 338 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 7-285 |
| Cow position: | chr23:19017375-19017661 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 7-386 |
| Cow position: | chr23:16481685-16481288 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 37, 233 |
| Conread position: | 19-482 |
| Cow position: | chr23:16617166-16616665 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 219 |
| Conread position: | 28-480 |
| Cow position: | chr23:27399197-27399683 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 323 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 18, 451 |
| Conread position: | 28-482 |
| Cow position: | chr23:3882001-3881524 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 313 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 28-482 |
| Cow position: | chr23:7273354-7273812 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 318 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 22, 145 |
| Conread position: | 28-482 |
| Cow position: | chr23:19489234-19489723 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 319 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 28-482 |
| Cow position: | chr23:28913106-28913577 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 21, 200 |
| Conread position: | 28-482 |
| Cow position: | chr23:30636608-30636120 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-488 |
| Cow position: | chr23:2795868-2795377 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 162 |
| Conread position: | 30-220 |
| Cow position: | chr23:16616169-16615969 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 32-483 |
| Cow position: | chr23:4640927-4640442 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 32-484 |
| Cow position: | chr23:15525311-15525793 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 54-482 |
| Cow position: | chr23:2524463-2524016 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 55-438 |
| Cow position: | chr23:2340124-2340532 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 118 |
| Conread position: | 73-482 |
| Cow position: | chr23:2313486-2313059 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 78-482 |
| Cow position: | chr23:28217047-28217471 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 93-479 |
| Cow position: | chr23:4815843-4816253 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 93-482 |
| Cow position: | chr23:2027345-2026938 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 158, 20 |
| Conread position: | 93-482 |
| Cow position: | chr23:2574336-2574716 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 93-482 |
| Cow position: | chr23:4888451-4888854 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 29, 335 |
| Conread position: | 93-482 |
| Cow position: | chr23:15176845-15177254 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 298 |
| Conread position: | 93-482 |
| Cow position: | chr23:36031598-36031192 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 158, 20 |
| Conread position: | 94-472 |
| Cow position: | chr23:19332625-19332237 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 94-482 |
| Cow position: | chr23:4751785-4752168 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 28, 199 |
| Conread position: | 102-482 |
| Cow position: | chr23:14965967-14965571 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 275 |
| Conread position: | 105-481 |
| Cow position: | chr23:22945277-22944892 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 145, 271 |
| Conread position: | 137-484 |
| Cow position: | chr23:26836121-26836458 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 163, 88 |
| Conread position: | 145-482 |
| Cow position: | chr23:6216399-6216751 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 204 |
| Conread position: | 154-498 |
| Cow position: | chr23:25684225-25683865 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 314-482 |
| Cow position: | chr23:31595224-31595055 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 315-482 |
| Cow position: | chr23:16615983-16615816 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 318-476 |
| Cow position: | chr23:31591787-31591627 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 318-482 |
| Cow position: | chr23:19450272-19450432 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 324-482 |
| Cow position: | chr23:20156195-20156034 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.