Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
| Conread position: | 1-281 |
| Cow position: | chr25:24171737-24172032 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-303 |
| Cow position: | chr25:20494063-20494372 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 43, 132 |
| Conread position: | 1-465 |
| Cow position: | chr25:3379010-3378548 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 319 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 92, 51 |
| Conread position: | 1-482 |
| Cow position: | chr25:11375644-11375125 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 344 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 2-498 |
| Cow position: | chr25:19916792-19917324 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 343 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 25, 486 |
| Conread position: | 7-307 |
| Cow position: | chr25:19288636-19288326 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 34, 138 |
| Conread position: | 7-482 |
| Cow position: | chr25:11933809-11933307 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 181 |
| Conread position: | 8-283 |
| Cow position: | chr25:37464266-37464539 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 22-281 |
| Cow position: | chr25:36240276-36240551 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 25-472 |
| Cow position: | chr25:12759860-12759384 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 321 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 25-482 |
| Cow position: | chr25:18092754-18093233 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 26-473 |
| Cow position: | chr25:17615530-17615057 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 300 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 264 |
| Conread position: | 28-482 |
| Cow position: | chr25:8674651-8675139 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 324 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 28-482 |
| Cow position: | chr25:18890279-18889792 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 337 |
| Conread position: | 28-482 |
| Cow position: | chr25:20629313-20629794 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 12, 365 |
| Conread position: | 28-482 |
| Cow position: | chr25:22147231-22147718 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-482 |
| Cow position: | chr25:26279002-26279480 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 148 |
| Conread position: | 28-488 |
| Cow position: | chr25:14015913-14016394 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 329 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 28-489 |
| Cow position: | chr25:13780772-13781260 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 40-482 |
| Cow position: | chr25:18027880-18027402 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 43-467 |
| Cow position: | chr25:17468941-17468490 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 78-482 |
| Cow position: | chr25:26922030-26922440 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 82-467 |
| Cow position: | chr25:13454989-13454598 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 12 |
| Conread position: | 93-482 |
| Cow position: | chr25:18060773-18060379 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 93-482 |
| Cow position: | chr25:34347179-34346794 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 212 |
| Conread position: | 95-471 |
| Cow position: | chr25:39560463-39560086 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 95-482 |
| Cow position: | chr25:18276009-18275605 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 162 |
| Conread position: | 99-468 |
| Cow position: | chr25:24218294-24217910 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 354 |
| Conread position: | 168-482 |
| Cow position: | chr25:23345450-23345115 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 91, 326 |
| Conread position: | 175-481 |
| Cow position: | chr25:33665972-33665651 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 219-484 |
| Cow position: | chr25:18421608-18421895 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 173 |
| Conread position: | 312-482 |
| Cow position: | chr25:36240608-36240779 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 319-476 |
| Cow position: | chr25:18303460-18303617 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 128 |
Show alignments to all cow chromosomes.