Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
| Conread position: | 1-254 |
| Cow position: | chr26:6489303-6489041 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 1-426 |
| Cow position: | chr26:20254798-20255242 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 303 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 1-482 |
| Cow position: | chr26:2198357-2198870 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 337 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 45, 484 |
| Conread position: | 1-482 |
| Cow position: | chr26:18854818-18855332 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 337 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 46, 468 |
| Conread position: | 1-498 |
| Cow position: | chr26:12588838-12588302 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 350 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 43, 490 |
| Conread position: | 2-482 |
| Cow position: | chr26:2352627-2352116 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 220 |
| Conread position: | 4-482 |
| Cow position: | chr26:12574657-12574165 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 7-196 |
| Cow position: | chr26:6516593-6516794 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 161 |
| Conread position: | 7-488 |
| Cow position: | chr26:8283312-8282812 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 9-411 |
| Cow position: | chr26:3074264-3074672 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 296 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 25-482 |
| Cow position: | chr26:11254304-11253812 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 28-482 |
| Cow position: | chr26:9563601-9563114 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 31-268 |
| Cow position: | chr26:17318082-17318325 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 31-482 |
| Cow position: | chr26:17397170-17396687 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 37-472 |
| Cow position: | chr26:16904547-16905006 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 310 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 78-388 |
| Cow position: | chr26:11301617-11301936 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 171, 16 |
| Conread position: | 93-266 |
| Cow position: | chr26:6602040-6602216 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 93-482 |
| Cow position: | chr26:15144923-15144516 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 158, 50 |
| Conread position: | 93-482 |
| Cow position: | chr26:19351679-19351270 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 122 |
| Conread position: | 102-475 |
| Cow position: | chr26:12656138-12656512 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 159-482 |
| Cow position: | chr26:20262762-20263096 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 259-482 |
| Cow position: | chr26:6488303-6488080 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 45 |
| Conread position: | 272-482 |
| Cow position: | chr26:9845547-9845334 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 312-488 |
| Cow position: | chr26:9849852-9849676 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 77, 127 |
| Conread position: | 312-488 |
| Cow position: | chr26:9853362-9853187 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 314-492 |
| Cow position: | chr26:12666181-12666357 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 139 |
| Conread position: | 337-482 |
| Cow position: | chr26:6849339-6849193 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.