Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 204
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               90, 164
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 42
               

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               254, 150
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               348
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 190
               

               Conread position:
               1-478
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               16, 233
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 216
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 477
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               341
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               92, 47
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 123
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               329
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               340
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 179
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               343
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               2-339
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               320
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               80, 233
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               337
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               36, 151
               

               Conread position:
               3-458
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               294
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               6-203
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               6-467
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 130
               

               Conread position:
               6-476
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 37
               

               Conread position:
               7-464
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               7-467
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               7-470
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 118
               

               Conread position:
               7-482
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               8-472
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               328
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               35, 134
               

               Conread position:
               10-482
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               17-297
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               18-298
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               18-356
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 39
               

               Conread position:
               20-228
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 141
               

               Conread position:
               22-482
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               326
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               23-484
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               25-253
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               25-429
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               59, 101
               

               Conread position:
               25-470
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               316
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 325
               

               Conread position:
               25-476
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 192
               

               Conread position:
               25-476
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               21, 467
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 232
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 408
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               321
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 454
               

               Conread position:
               25-488
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 380
               

               Conread position:
               28-247
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 167
               

               Conread position:
               28-302
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               28-401
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               28-464
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 184
               

               Conread position:
               28-473
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               307
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               324
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               325
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               323
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 177
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               322
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               21, 199
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               325
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               324
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               18, 118
               

               Conread position:
               28-484
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               325
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               21, 366
               

               Conread position:
               28-491
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               30-482
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               31-390
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 154
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               309
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               218, 33
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               325
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               19, 158
               

               Conread position:
               31-484
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 258
               

               Conread position:
               31-484
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 195
               

               Conread position:
               31-488
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 29
               

               Conread position:
               31-493
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               331
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               37-476
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               315
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               39-489
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 181
               

               Conread position:
               40-467
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               45-472
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               312
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               46-482
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               48-471
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               281
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               203, 59
               

               Conread position:
               74-441
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               78-279
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               85-469
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               165, 9
               

               Conread position:
               93-470
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               93-473
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               93-475
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               158, 20
               

               Conread position:
               93-478
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               279
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 122
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 381
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               297, 20
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               158, 25
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               93-493
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 215
               

               Conread position:
               94-482
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 120
               

               Conread position:
               98-482
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 117
               

               Conread position:
               101-482
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               106-303
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               106-307
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               117-488
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               138-482
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               113, 77
               

               Conread position:
               156-482
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 173
               

               Conread position:
               208-479
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 140
               

               Conread position:
               299-482
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               303-476
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               312-481
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               318-464
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 0
               
Show alignments to all cow chromosomes.