Cow genome map
Conread name: | Ss1.1-Pig4-TMW8032J18.3 |
Conread position: | 1-297 |
Cow position: | chr5:28570185-28570500 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 31 |
Conread position: | 1-476 |
Cow position: | chr5:2530761-2531273 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 333 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 43, 489 |
Conread position: | 1-482 |
Cow position: | chr5:9686919-9686420 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 326 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 81, 280 |
Conread position: | 1-482 |
Cow position: | chr5:26769300-26769812 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 346 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 17, 110 |
Conread position: | 1-482 |
Cow position: | chr5:28030980-28031485 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 60 |
Conread position: | 1-482 |
Cow position: | chr5:32733756-32733244 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 202 |
Conread position: | 1-482 |
Cow position: | chr5:39165311-39164792 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 399 |
Conread position: | 1-482 |
Cow position: | chr5:45182608-45182095 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 332 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 45, 142 |
Conread position: | 1-482 |
Cow position: | chr5:49181773-49182276 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 133 |
Conread position: | 1-482 |
Cow position: | chr5:61273675-61273179 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 320 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 13, 101 |
Conread position: | 1-484 |
Cow position: | chr5:49128743-49129230 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 318 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 46, 103 |
Conread position: | 1-491 |
Cow position: | chr5:34202434-34202952 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 357 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 17, 194 |
Conread position: | 2-476 |
Cow position: | chr5:26090330-26089829 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 339 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 23, 11 |
Conread position: | 2-482 |
Cow position: | chr5:49101128-49101642 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 125 |
Conread position: | 2-482 |
Cow position: | chr5:49593971-49593447 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 349 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 16, 255 |
Conread position: | 2-484 |
Cow position: | chr5:53627269-53626750 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 222 |
Conread position: | 4-479 |
Cow position: | chr5:24329800-24330278 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 19 |
Conread position: | 6-440 |
Cow position: | chr5:57366516-57366058 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 115 |
Conread position: | 7-279 |
Cow position: | chr5:30088215-30087934 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 198 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 84, 12 |
Conread position: | 7-489 |
Cow position: | chr5:23756081-23755604 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 308 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 38, 141 |
Conread position: | 9-279 |
Cow position: | chr5:27488526-27488807 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 195 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 86, 27 |
Conread position: | 9-284 |
Cow position: | chr5:51771842-51771553 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 203 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 45, 19 |
Conread position: | 14-482 |
Cow position: | chr5:45699785-45700274 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 165 |
Conread position: | 19-482 |
Cow position: | chr5:32945391-32945882 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 187 |
Conread position: | 22-285 |
Cow position: | chr5:27569669-27569948 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 198 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 71, 26 |
Conread position: | 22-476 |
Cow position: | chr5:46659241-46659717 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 307 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 57, 21 |
Conread position: | 22-482 |
Cow position: | chr5:416206-415714 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 331 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 8, 109 |
Conread position: | 22-482 |
Cow position: | chr5:32674208-32673732 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 323 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 73, 6 |
Conread position: | 23-482 |
Cow position: | chr5:55627520-55627994 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 306 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 26, 102 |
Conread position: | 25-482 |
Cow position: | chr5:10776735-10776256 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 300 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 21, 300 |
Conread position: | 25-482 |
Cow position: | chr5:29042029-29042519 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 324 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 21, 409 |
Conread position: | 25-482 |
Cow position: | chr5:31706092-31706582 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 323 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 21, 404 |
Conread position: | 25-482 |
Cow position: | chr5:32771999-32772490 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 326 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 21, 462 |
Conread position: | 25-482 |
Cow position: | chr5:57483029-57482538 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 327 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 25-484 |
Cow position: | chr5:27909750-27909262 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 320 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 21, 105 |
Conread position: | 26-482 |
Cow position: | chr5:41359213-41358735 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 244 |
Conread position: | 28-279 |
Cow position: | chr5:58061302-58061051 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 179 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 94, 71 |
Conread position: | 28-464 |
Cow position: | chr5:3785332-3785780 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 296 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 28-481 |
Cow position: | chr5:41530049-41529586 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 308 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 18, 106 |
Conread position: | 28-482 |
Cow position: | chr5:2430611-2430124 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 28-482 |
Cow position: | chr5:10918318-10918806 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 314 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 28-482 |
Cow position: | chr5:37731866-37732354 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 28-482 |
Cow position: | chr5:48809193-48808707 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 98 |
Conread position: | 28-482 |
Cow position: | chr5:49119757-49119273 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 311 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 28-484 |
Cow position: | chr5:64782496-64782008 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 199 |
Conread position: | 32-482 |
Cow position: | chr5:4068515-4068998 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 323 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 17, 159 |
Conread position: | 38-482 |
Cow position: | chr5:29436386-29435956 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 294 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 18, 143 |
Conread position: | 43-384 |
Cow position: | chr5:27683221-27682861 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 251 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 45, 66 |
Conread position: | 76-435 |
Cow position: | chr5:16104182-16103817 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 245 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 55, 39 |
Conread position: | 93-376 |
Cow position: | chr5:34696181-34696484 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 201 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 93-409 |
Cow position: | chr5:56858099-56857769 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 129 |
Conread position: | 93-482 |
Cow position: | chr5:1342198-1341790 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 276 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 33, 365 |
Conread position: | 93-482 |
Cow position: | chr5:28022764-28023161 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 20 |
Conread position: | 93-482 |
Cow position: | chr5:44459080-44459491 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 275 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 47, 382 |
Conread position: | 93-482 |
Cow position: | chr5:46738987-46738577 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 276 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 93-482 |
Cow position: | chr5:58195600-58196010 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 276 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 47, 71 |
Conread position: | 93-484 |
Cow position: | chr5:58056137-58055741 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 287 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 35, 47 |
Conread position: | 93-489 |
Cow position: | chr5:49518264-49518673 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 276 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 158, 20 |
Conread position: | 94-484 |
Cow position: | chr5:30578921-30579332 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 280 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 95-268 |
Cow position: | chr5:49020081-49019904 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 33, 118 |
Conread position: | 95-480 |
Cow position: | chr5:59845183-59844796 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 249 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 20, 74 |
Conread position: | 110-482 |
Cow position: | chr5:41962618-41962230 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 266 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 18, 27 |
Conread position: | 111-472 |
Cow position: | chr5:14659473-14659097 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 265 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 20, 67 |
Conread position: | 134-482 |
Cow position: | chr5:58334943-58334587 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 230 |
Conread position: | 153-481 |
Cow position: | chr5:27652318-27651975 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 241 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 114, 23 |
Conread position: | 156-468 |
Cow position: | chr5:26069051-26068728 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 238 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 98, 206 |
Conread position: | 156-482 |
Cow position: | chr5:39872081-39872411 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 36 |
Conread position: | 179-476 |
Cow position: | chr5:52433662-52433969 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 224 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 72, 34 |
Conread position: | 311-482 |
Cow position: | chr5:27001446-27001617 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 78, 87 |
Conread position: | 312-482 |
Cow position: | chr5:24108753-24108582 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 123 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 77, 113 |
Conread position: | 318-476 |
Cow position: | chr5:57977102-57977260 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 71, 128 |
Conread position: | 318-484 |
Cow position: | chr5:5786764-5786597 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 117 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 324-479 |
Cow position: | chr5:18653894-18654050 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 112 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 324-482 |
Cow position: | chr5:73489712-73489553 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 324-484 |
Cow position: | chr5:12644089-12643931 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 66, 83 |
Conread position: | 326-482 |
Cow position: | chr5:17774189-17774032 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.