Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               39, 210
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 233
               

               Conread position:
               1-458
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               1-471
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               333
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               17, 180
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               341
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               347
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               17, 137
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               1-498
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               46, 468
               

               Conread position:
               2-172
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 140
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               339
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               91, 73
               

               Conread position:
               2-489
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 242
               

               Conread position:
               3-482
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               312
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               24, 189
               

               Conread position:
               4-482
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               331
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 119
               

               Conread position:
               7-281
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               7-390
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 225
               

               Conread position:
               7-464
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 188
               

               Conread position:
               7-475
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               7-482
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 229
               

               Conread position:
               9-472
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               326
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               82, 138
               

               Conread position:
               10-513
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 502
               

               Conread position:
               17-487
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               19-452
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 276
               

               Conread position:
               22-476
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               25-416
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               25-476
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               25-489
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               328
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               26-476
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               312
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               15, 95
               

               Conread position:
               28-471
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               28-476
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               310
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               18, 128
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               305
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               21, 114
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               324
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               13, 148
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               317
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 199
               

               Conread position:
               28-483
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 176
               

               Conread position:
               31-467
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               315
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               15, 426
               

               Conread position:
               31-476
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               10, 161
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               326
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 220
               

               Conread position:
               31-484
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 59
               

               Conread position:
               32-482
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               332
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               33-395
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 327
               

               Conread position:
               33-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               319
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               49, 174
               

               Conread position:
               46-390
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               74-489
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               76-484
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               180, 18
               

               Conread position:
               91-254
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               91-286
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               92-390
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               159, 94
               

               Conread position:
               92-482
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               93-410
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               93-464
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               34, 212
               

               Conread position:
               93-476
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               93-481
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               47, 382
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 359
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               29, 382
               

               Conread position:
               93-497
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               158, 50
               

               Conread position:
               93-498
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               98-484
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               24, 117
               

               Conread position:
               99-303
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               101-428
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 338
               

               Conread position:
               102-481
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 392
               

               Conread position:
               103-476
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               146, 52
               

               Conread position:
               103-482
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 172
               

               Conread position:
               103-482
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 122
               

               Conread position:
               108-484
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 127
               

               Conread position:
               136-484
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               138-482
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               140-471
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 74
               

               Conread position:
               150-470
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 63
               

               Conread position:
               159-482
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               187-480
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               211-481
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               211-482
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 180
               

               Conread position:
               211-488
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               312-488
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 93
               

               Conread position:
               312-489
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 90
               

               Conread position:
               317-482
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 107
               

               Conread position:
               333-482
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               347-488
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 0
               
Show alignments to all cow chromosomes.