Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 265
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               49, 144
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 174
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               327
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               47, 137
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               337
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               3-476
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               342
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 279
               

               Conread position:
               7-246
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               7-286
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               7-466
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               336
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 249
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               91, 38
               

               Conread position:
               22-482
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               23-482
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               26-476
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               52, 195
               

               Conread position:
               28-476
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               28-480
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               331
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               328
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 161
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               326
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               65, 182
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               322
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               31-476
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               62, 456
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 348
               

               Conread position:
               31-484
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               32-466
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               32-480
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 136
               

               Conread position:
               32-482
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               34-231
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               34-281
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 92
               

               Conread position:
               50-254
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               74-381
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               174, 20
               

               Conread position:
               74-489
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               75-476
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               49, 19
               

               Conread position:
               76-483
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               78-482
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               277
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               93-285
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 122
               

               Conread position:
               93-427
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               93-464
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 190
               

               Conread position:
               93-476
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 122
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               93-489
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               40, 374
               

               Conread position:
               94-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               37, 122
               

               Conread position:
               94-484
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               96-484
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 281
               

               Conread position:
               102-481
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               102-482
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               136-281
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               136-471
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               115, 74
               

               Conread position:
               136-482
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               121, 147
               

               Conread position:
               156-482
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               95, 57
               

               Conread position:
               165-482
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               134, 49
               

               Conread position:
               182-478
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               195-482
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               194, 43
               

               Conread position:
               263-482
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               311-482
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 143
               

               Conread position:
               311-482
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               312-483
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               313-491
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               318-482
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               327-482
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.