Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8032J18.3
        

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               38, 193
               

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 176
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               1-390
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-455
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 176
               

               Conread position:
               1-462
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               1-481
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               333
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               339
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 42
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               337
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               2-489
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 204
               

               Conread position:
               6-482
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 330
               

               Conread position:
               6-482
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               342
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               7-472
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 149
               

               Conread position:
               7-472
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               7-485
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               325
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               166, 36
               

               Conread position:
               9-201
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 194
               

               Conread position:
               9-482
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               18-460
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 134
               

               Conread position:
               19-354
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               74, 142
               

               Conread position:
               25-470
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 163
               

               Conread position:
               25-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               26-471
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               310
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               28-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               305
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 238
               

               Conread position:
               28-476
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 192
               

               Conread position:
               28-476
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               313
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               21, 155
               

               Conread position:
               28-476
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-481
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               320
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 156
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 199
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 156
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               318
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-482
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               325
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               21, 419
               

               Conread position:
               28-484
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               326
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 417
               

               Conread position:
               28-484
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               329
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               28-487
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               318
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               31-482
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               34-481
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 207
               

               Conread position:
               34-483
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               70-466
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               73-482
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               74-482
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               277
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               74-482
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               284
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               177, 20
               

               Conread position:
               74-482
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               288
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               74-482
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               78-476
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               85-480
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               90-476
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               163, 5
               

               Conread position:
               93-480
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 384
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 286
               

               Conread position:
               93-482
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               93-483
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               100-469
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               157, 138
               

               Conread position:
               101-387
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               136-482
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               176-484
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               76, 93
               

               Conread position:
               251-452
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               138, 55
               

               Conread position:
               310-482
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 132
               

               Conread position:
               311-482
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               79, 143
               

               Conread position:
               312-477
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 144
               

               Conread position:
               312-482
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               313-482
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 141
               

               Conread position:
               318-483
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               326-482
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               91, 58
               

               Conread position:
               331-482
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               58, 0
               
Show alignments to all cow chromosomes.