Cow genome map

Conread name: Ss1.1-Pig4-TMW8032J18.3

Conread position: 1-449
Cow position:
Alignm length: 485
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 1-462
Cow position:
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 393

Conread position: 1-470
Cow position:
Alignm length: 481
Alignm identity: 318
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 88

Conread position: 1-473
Cow position:
Alignm length: 507
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 229

Conread position: 1-476
Cow position:
Alignm length: 507
Alignm identity: 328
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 138

Conread position: 1-482
Cow position:
Alignm length: 517
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 126

Conread position: 1-482
Cow position:
Alignm length: 519
Alignm identity: 345
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 130

Conread position: 1-482
Cow position:
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-482
Cow position:
Alignm length: 503
Alignm identity: 336
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 137

Conread position: 1-484
Cow position:
Alignm length: 514
Alignm identity: 323
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 1-484
Cow position:
Alignm length: 521
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 147

Conread position: 1-488
Cow position:
Alignm length: 533
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 202

Conread position: 1-498
Cow position:
Alignm length: 534
Alignm identity: 344
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 486

Conread position: 2-480
Cow position:
Alignm length: 514
Alignm identity: 339
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 89, 41

Conread position: 2-480
Cow position:
Alignm length: 521
Alignm identity: 337
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 422

Conread position: 2-482
Cow position:
Alignm length: 516
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 178

Conread position: 2-482
Cow position:
Alignm length: 503
Alignm identity: 320
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 226

Conread position: 6-462
Cow position:
Alignm length: 477
Alignm identity: 297
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 88

Conread position: 6-470
Cow position:
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 231

Conread position: 7-372
Cow position:
Alignm length: 392
Alignm identity: 258
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 30

Conread position: 7-410
Cow position:
Alignm length: 433
Alignm identity: 300
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 126

Conread position: 7-422
Cow position:
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 127

Conread position: 7-472
Cow position:
Alignm length: 488
Alignm identity: 318
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 75, 18

Conread position: 7-482
Cow position:
Alignm length: 501
Alignm identity: 322
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 30

Conread position: 7-482
Cow position:
Alignm length: 492
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 173

Conread position: 7-482
Cow position:
Alignm length: 494
Alignm identity: 321
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 113

Conread position: 8-453
Cow position:
Alignm length: 467
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 215

Conread position: 9-471
Cow position:
Alignm length: 500
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 113

Conread position: 22-484
Cow position:
Alignm length: 486
Alignm identity: 303
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 6

Conread position: 22-484
Cow position:
Alignm length: 494
Alignm identity: 335
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 69, 173

Conread position: 23-482
Cow position:
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 25-281
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 104

Conread position: 25-470
Cow position:
Alignm length: 478
Alignm identity: 312
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 106

Conread position: 25-482
Cow position:
Alignm length: 492
Alignm identity: 323
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 461

Conread position: 25-482
Cow position:
Alignm length: 492
Alignm identity: 318
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 25-482
Cow position:
Alignm length: 493
Alignm identity: 323
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 462

Conread position: 26-482
Cow position:
Alignm length: 491
Alignm identity: 324
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 28-469
Cow position:
Alignm length: 476
Alignm identity: 311
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 161

Conread position: 28-471
Cow position:
Alignm length: 475
Alignm identity: 316
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 107

Conread position: 28-476
Cow position:
Alignm length: 483
Alignm identity: 320
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 346

Conread position: 28-482
Cow position:
Alignm length: 489
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 28-482
Cow position:
Alignm length: 489
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 28-482
Cow position:
Alignm length: 489
Alignm identity: 323
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 28-482
Cow position:
Alignm length: 487
Alignm identity: 319
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 23, 97

Conread position: 28-482
Cow position:
Alignm length: 484
Alignm identity: 323
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 114

Conread position: 28-482
Cow position:
Alignm length: 487
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 99

Conread position: 28-482
Cow position:
Alignm length: 484
Alignm identity: 317
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 194

Conread position: 28-482
Cow position:
Alignm length: 486
Alignm identity: 316
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 0

Conread position: 28-482
Cow position:
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 28-484
Cow position:
Alignm length: 490
Alignm identity: 320
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 97

Conread position: 28-484
Cow position:
Alignm length: 475
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 73

Conread position: 28-489
Cow position:
Alignm length: 496
Alignm identity: 323
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 153

Conread position: 31-270
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 88

Conread position: 31-453
Cow position:
Alignm length: 443
Alignm identity: 286
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 14, 77

Conread position: 31-471
Cow position:
Alignm length: 471
Alignm identity: 296
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 90

Conread position: 31-472
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 209

Conread position: 31-476
Cow position:
Alignm length: 481
Alignm identity: 317
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 381

Conread position: 31-476
Cow position:
Alignm length: 478
Alignm identity: 313
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 102

Conread position: 31-476
Cow position:
Alignm length: 473
Alignm identity: 304
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 31-482
Cow position:
Alignm length: 473
Alignm identity: 310
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 59

Conread position: 31-482
Cow position:
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 35-482
Cow position:
Alignm length: 468
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 81

Conread position: 43-281
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 153

Conread position: 73-482
Cow position:
Alignm length: 431
Alignm identity: 286
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 21

Conread position: 73-482
Cow position:
Alignm length: 431
Alignm identity: 286
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 21

Conread position: 74-482
Cow position:
Alignm length: 427
Alignm identity: 278
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 20

Conread position: 78-482
Cow position:
Alignm length: 428
Alignm identity: 276
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 16

Conread position: 78-482
Cow position:
Alignm length: 417
Alignm identity: 270
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 62, 16

Conread position: 87-484
Cow position:
Alignm length: 418
Alignm identity: 271
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 12

Conread position: 88-307
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 40, 124

Conread position: 92-468
Cow position:
Alignm length: 395
Alignm identity: 256
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 29

Conread position: 93-303
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 158, 34

Conread position: 93-413
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 81

Conread position: 93-473
Cow position:
Alignm length: 404
Alignm identity: 263
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 57

Conread position: 93-476
Cow position:
Alignm length: 388
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 43

Conread position: 93-476
Cow position:
Alignm length: 415
Alignm identity: 282
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 29, 249

Conread position: 93-476
Cow position:
Alignm length: 405
Alignm identity: 275
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 20

Conread position: 93-480
Cow position:
Alignm length: 409
Alignm identity: 274
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 49, 122

Conread position: 93-482
Cow position:
Alignm length: 413
Alignm identity: 274
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 93-482
Cow position:
Alignm length: 413
Alignm identity: 271
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 382

Conread position: 93-482
Cow position:
Alignm length: 411
Alignm identity: 267
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 25

Conread position: 93-482
Cow position:
Alignm length: 411
Alignm identity: 269
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 14

Conread position: 93-482
Cow position:
Alignm length: 414
Alignm identity: 273
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 122

Conread position: 93-482
Cow position:
Alignm length: 415
Alignm identity: 276
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 25

Conread position: 93-482
Cow position:
Alignm length: 415
Alignm identity: 274
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 282

Conread position: 93-482
Cow position:
Alignm length: 417
Alignm identity: 271
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 93-482
Cow position:
Alignm length: 408
Alignm identity: 277
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 29, 84

Conread position: 93-482
Cow position:
Alignm length: 413
Alignm identity: 275
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 382

Conread position: 93-484
Cow position:
Alignm length: 413
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 93-489
Cow position:
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 93-493
Cow position:
Alignm length: 423
Alignm identity: 279
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 381

Conread position: 94-482
Cow position:
Alignm length: 401
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 42

Conread position: 95-476
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 170, 23

Conread position: 96-488
Cow position:
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 17

Conread position: 99-484
Cow position:
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 14

Conread position: 102-482
Cow position:
Alignm length: 395
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 105-484
Cow position:
Alignm length: 403
Alignm identity: 255
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 29

Conread position: 106-488
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 27, 212

Conread position: 130-434
Cow position:
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 77

Conread position: 134-471
Cow position:
Alignm length: 363
Alignm identity: 255
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 17, 81

Conread position: 159-482
Cow position:
Alignm length: 345
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 54

Conread position: 176-482
Cow position:
Alignm length: 328
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 297

Conread position: 177-489
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 191-482
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 282

Conread position: 208-485
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 93, 32

Conread position: 210-482
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 216-484
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 201

Conread position: 248-478
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 213

Conread position: 305-476
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 53, 7

Conread position: 311-482
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 143

Conread position: 311-482
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 48

Conread position: 312-435
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 312-481
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 50

Conread position: 312-482
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 312-482
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 312-482
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 312-489
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 318-474
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 319-482
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 324-482
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 325-482
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 328-466
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 19

Show alignments to all cow chromosomes.