Cow genome map

Conread name: Ss1.1-Pig4-TMW8032P24.3

Conread position: 326-694
Cow position: chr11:42066863-42067228 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 33, 10

Conread position: 327-511
Cow position: chr11:11469652-11469470 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 92

Conread position: 350-494
Cow position: chr11:81135147-81135003 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 73

Conread position: 352-496
Cow position: chr11:85986026-85985881 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 354-543
Cow position: chr11:65431544-65431737 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 150, 68

Conread position: 358-497
Cow position: chr11:20238706-20238845 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 359-497
Cow position: chr11:17721771-17721632 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 359-508
Cow position: chr11:40608564-40608412 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 80

Conread position: 359-509
Cow position: chr11:42206452-42206598 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 62

Conread position: 359-522
Cow position: chr11:30986669-30986835 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 63

Conread position: 359-527
Cow position: chr11:63866629-63866459 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 62

Conread position: 359-529
Cow position: chr11:27248521-27248693 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 63

Conread position: 359-530
Cow position: chr11:62620407-62620580 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 61

Conread position: 359-559
Cow position: chr11:4621400-4621202 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 63

Conread position: 360-529
Cow position: chr11:48315365-48315194 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 138, 61

Conread position: 361-509
Cow position: chr11:62789163-62789309 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 140, 61

Conread position: 361-521
Cow position: chr11:29960328-29960486 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 59

Conread position: 361-529
Cow position: chr11:23407497-23407664 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 61

Conread position: 362-497
Cow position: chr11:70821078-70821213 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 36

Conread position: 362-524
Cow position: chr11:55911613-55911448 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 370-724
Cow position: chr11:23279116-23278776 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 39, 35

Conread position: 406-733
Cow position: chr11:75246247-75246566 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 197, 13

Conread position: 499-720
Cow position: chr11:31325985-31326202 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 157, 17

Conread position: 521-749
Cow position: chr11:42066865-42067075 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 7

Conread position: 524-704
Cow position: chr11:6633714-6633893 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 524-716
Cow position: chr11:67312784-67312964 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 12

Conread position: 524-721
Cow position: chr11:16907045-16906847 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 118, 19

Conread position: 524-728
Cow position: chr11:29699697-29699496 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 524-728
Cow position: chr11:60296734-60296929 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 524-729
Cow position: chr11:73984000-73983798 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 524-734
Cow position: chr11:48649976-48650184 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 12

Conread position: 524-736
Cow position: chr11:17638531-17638319 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 72, 12

Conread position: 524-742
Cow position: chr11:4436751-4436969 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 190, 12

Conread position: 524-745
Cow position: chr11:72375679-72375458 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 12

Conread position: 524-753
Cow position: chr11:6267199-6267430 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 12

Conread position: 524-753
Cow position: chr11:84775078-84775306 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 12

Conread position: 527-702
Cow position: chr11:65803865-65803681 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 527-704
Cow position: chr11:70741148-70741323 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 65

Conread position: 527-708
Cow position: chr11:19606583-19606765 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 527-718
Cow position: chr11:69075916-69076114 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 527-719
Cow position: chr11:952275-952468 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 17

Conread position: 527-719
Cow position: chr11:44234361-44234557 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 527-720
Cow position: chr11:5201646-5201463 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 527-720
Cow position: chr11:15382497-15382312 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 527-721
Cow position: chr11:1932486-1932304 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 90

Conread position: 527-721
Cow position: chr11:72292558-72292745 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 527-723
Cow position: chr11:8437688-8437504 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 527-723
Cow position: chr11:65762585-65762399 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 527-731
Cow position: chr11:34646595-34646789 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 527-732
Cow position: chr11:17195825-17195621 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 65

Conread position: 527-732
Cow position: chr11:49255410-49255605 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 527-733
Cow position: chr11:261262-261060 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 195, 87

Conread position: 527-733
Cow position: chr11:11647079-11647293 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 26

Conread position: 527-733
Cow position: chr11:35153818-35153624 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 527-734
Cow position: chr11:20761853-20762049 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 527-734
Cow position: chr11:62225992-62226206 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 527-737
Cow position: chr11:80008062-80007858 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 195, 61

Conread position: 527-743
Cow position: chr11:41293812-41293597 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 114, 86

Conread position: 527-754
Cow position: chr11:47882809-47883041 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 115, 93

Conread position: 527-763
Cow position: chr11:63999086-63998866 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 528-725
Cow position: chr11:30485659-30485845 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 529-729
Cow position: chr11:42192180-42191987 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 530-731
Cow position: chr11:80564302-80564493 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 187, 62

Conread position: 535-712
Cow position: chr11:377628-377445 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 535-720
Cow position: chr11:71443226-71443039 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 52

Conread position: 535-722
Cow position: chr11:83323577-83323762 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 91

Conread position: 535-723
Cow position: chr11:22747317-22747122 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 535-724
Cow position: chr11:47110262-47110443 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 535-724
Cow position: chr11:79466225-79466409 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 535-725
Cow position: chr11:77208088-77208275 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 535-727
Cow position: chr11:42786674-42786492 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 535-728
Cow position: chr11:17321661-17321858 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 23

Conread position: 535-728
Cow position: chr11:50072951-50073146 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 535-728
Cow position: chr11:82730984-82730793 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 535-732
Cow position: chr11:47784788-47784976 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 188, 57

Conread position: 535-734
Cow position: chr11:49210808-49210620 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 536-721
Cow position: chr11:81605872-81606063 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 536-730
Cow position: chr11:17831207-17831013 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 181, 87

Conread position: 536-754
Cow position: chr11:18777584-18777378 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 537-734
Cow position: chr11:61454501-61454306 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 127, 117

Conread position: 537-747
Cow position: chr11:3283039-3283250 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 76, 183

Conread position: 544-720
Cow position: chr11:36917754-36917582 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 52

Conread position: 544-724
Cow position: chr11:11483334-11483508 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 546-724
Cow position: chr11:42183056-42183226 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 548-726
Cow position: chr11:69421686-69421516 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 548-732
Cow position: chr11:25614787-25614608 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 38

Conread position: 551-752
Cow position: chr11:65431548-65431734 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 174, 64

Conread position: 552-735
Cow position: chr11:61526095-61526278 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 38

Conread position: 553-727
Cow position: chr11:63640841-63640667 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 62

Conread position: 617-734
Cow position: chr11:15591399-15591283 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.