Cow genome map

Conread name: Ss1.1-Pig4-TMW8032P24.3

Conread position: 326-497
Cow position: chr13:13320768-13320598 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 94

Conread position: 342-523
Cow position: chr13:14645006-14644825 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 79

Conread position: 344-526
Cow position: chr13:18197655-18197835 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 66

Conread position: 350-497
Cow position: chr13:19393238-19393097 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 358-521
Cow position: chr13:23399704-23399542 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 64

Conread position: 359-497
Cow position: chr13:16525286-16525427 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 15

Conread position: 359-497
Cow position: chr13:20217461-20217597 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 359-497
Cow position: chr13:33854747-33854880 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 359-497
Cow position: chr13:41806709-41806577 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 359-502
Cow position: chr13:20288275-20288134 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 359-509
Cow position: chr13:42200556-42200408 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 63

Conread position: 359-517
Cow position: chr13:20784527-20784373 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 63

Conread position: 359-518
Cow position: chr13:13088966-13088812 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 359-518
Cow position: chr13:14063584-14063744 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 76

Conread position: 359-518
Cow position: chr13:26395398-26395239 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 359-518
Cow position: chr13:53619941-53619775 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 359-522
Cow position: chr13:23478839-23478674 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 63

Conread position: 359-522
Cow position: chr13:28081659-28081487 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 359-524
Cow position: chr13:6951516-6951355 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 359-524
Cow position: chr13:17021789-17021954 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 122, 15

Conread position: 359-524
Cow position: chr13:26698561-26698724 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 142, 63

Conread position: 359-527
Cow position: chr13:26377479-26377650 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 47

Conread position: 359-527
Cow position: chr13:37554936-37555107 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 140, 63

Conread position: 359-529
Cow position: chr13:43342505-43342335 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 46

Conread position: 359-547
Cow position: chr13:21170463-21170281 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 359-556
Cow position: chr13:20314685-20314881 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 63

Conread position: 359-740
Cow position: chr13:50768536-50768162 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 258
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 40

Conread position: 360-497
Cow position: chr13:971961-972096 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 360-509
Cow position: chr13:52477711-52477857 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 141, 17

Conread position: 362-526
Cow position: chr13:15257433-15257595 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 58

Conread position: 364-489
Cow position: chr13:25924290-25924413 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 365-505
Cow position: chr13:35557180-35557319 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 57

Conread position: 370-496
Cow position: chr13:62304497-62304371 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 501-742
Cow position: chr13:2137099-2136854 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 93

Conread position: 506-753
Cow position: chr13:3209335-3209584 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 110

Conread position: 514-719
Cow position: chr13:38702652-38702849 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 59

Conread position: 515-731
Cow position: chr13:54682077-54681869 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 515-735
Cow position: chr13:47644037-47643820 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 16

Conread position: 519-728
Cow position: chr13:6183451-6183652 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 521-716
Cow position: chr13:5992823-5992637 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 521-729
Cow position: chr13:18215333-18215136 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 522-742
Cow position: chr13:8478370-8478144 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 7

Conread position: 522-747
Cow position: chr13:17619578-17619351 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 14

Conread position: 524-717
Cow position: chr13:19750679-19750487 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 12

Conread position: 524-727
Cow position: chr13:3315711-3315906 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 524-728
Cow position: chr13:6113562-6113753 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 77, 12

Conread position: 524-732
Cow position: chr13:45023244-45023448 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 524-733
Cow position: chr13:39398615-39398404 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 12

Conread position: 526-749
Cow position: chr13:8355167-8354933 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 22

Conread position: 527-720
Cow position: chr13:16099159-16099342 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 527-720
Cow position: chr13:20679301-20679101 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 184

Conread position: 527-721
Cow position: chr13:18696802-18696609 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 527-722
Cow position: chr13:8350285-8350087 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 527-722
Cow position: chr13:20706243-20706441 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 158

Conread position: 527-722
Cow position: chr13:21135939-21136127 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 92

Conread position: 527-723
Cow position: chr13:19022233-19022048 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 527-724
Cow position: chr13:55316229-55316440 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 527-725
Cow position: chr13:53850786-53850602 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 527-727
Cow position: chr13:49503570-49503758 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 527-728
Cow position: chr13:23960840-23961028 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 527-728
Cow position: chr13:37621398-37621596 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 527-730
Cow position: chr13:6086931-6087136 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 57

Conread position: 527-731
Cow position: chr13:20314660-20314849 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 88

Conread position: 527-733
Cow position: chr13:56155192-56155398 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 16

Conread position: 527-734
Cow position: chr13:11103237-11103435 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 89

Conread position: 527-734
Cow position: chr13:33854722-33854908 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 527-734
Cow position: chr13:49255278-49255488 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 527-740
Cow position: chr13:26423013-26422806 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 527-756
Cow position: chr13:13260962-13260744 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 527-768
Cow position: chr13:52880906-52881145 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 16

Conread position: 528-724
Cow position: chr13:52057518-52057323 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 126, 87

Conread position: 528-736
Cow position: chr13:37984168-37984380 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 41

Conread position: 529-724
Cow position: chr13:17971070-17971256 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 530-722
Cow position: chr13:17619851-17619663 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 530-758
Cow position: chr13:5930346-5930563 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 189, 84

Conread position: 535-712
Cow position: chr13:37803846-37803674 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 8, 79

Conread position: 535-723
Cow position: chr13:40154776-40154956 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 535-724
Cow position: chr13:19467384-19467573 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 63

Conread position: 535-727
Cow position: chr13:20531520-20531716 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 535-733
Cow position: chr13:9265873-9266075 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 72

Conread position: 535-734
Cow position: chr13:52586083-52586289 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 535-738
Cow position: chr13:35659713-35659521 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 153, 15

Conread position: 535-740
Cow position: chr13:29957979-29957775 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 51

Conread position: 535-740
Cow position: chr13:38872990-38873194 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 176, 78

Conread position: 535-752
Cow position: chr13:7076211-7075999 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 103, 78

Conread position: 535-754
Cow position: chr13:22761629-22761856 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 48

Conread position: 535-754
Cow position: chr13:27419122-27419337 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 536-702
Cow position: chr13:18701325-18701157 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 76

Conread position: 536-723
Cow position: chr13:53619957-53619784 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 536-735
Cow position: chr13:43811893-43811700 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 181, 87

Conread position: 536-740
Cow position: chr13:5079411-5079613 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 55

Conread position: 544-744
Cow position: chr13:28081667-28081476 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 182, 61

Conread position: 552-724
Cow position: chr13:52921822-52921659 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 556-724
Cow position: chr13:52199060-52198888 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 140

Conread position: 556-735
Cow position: chr13:45141989-45142164 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 560-728
Cow position: chr13:20684199-20684372 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 560-749
Cow position: chr13:57475477-57475659 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 602-725
Cow position: chr13:27837591-27837711 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 627-751
Cow position: chr13:27173964-27174092 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 642-759
Cow position: chr13:21201525-21201642 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.