Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032P24.3 |
| Conread position: | 358-527 |
| Cow position: | chr14:22989029-22988860 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 359-497 |
| Cow position: | chr14:21357552-21357414 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 359-497 |
| Cow position: | chr14:32784121-32784261 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 359-497 |
| Cow position: | chr14:33714684-33714817 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 359-497 |
| Cow position: | chr14:45677224-45677088 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 359-509 |
| Cow position: | chr14:15228534-15228390 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-510 |
| Cow position: | chr14:11280119-11280269 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 359-522 |
| Cow position: | chr14:10706870-10706710 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 359-524 |
| Cow position: | chr14:35651791-35651952 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 359-526 |
| Cow position: | chr14:13845979-13845817 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 359-530 |
| Cow position: | chr14:20667014-20667186 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 359-533 |
| Cow position: | chr14:20110728-20110902 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 136, 63 |
| Conread position: | 359-534 |
| Cow position: | chr14:20640635-20640810 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 142, 63 |
| Conread position: | 359-756 |
| Cow position: | chr14:29632125-29631709 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 360-495 |
| Cow position: | chr14:41749766-41749897 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 360-497 |
| Cow position: | chr14:48427067-48426929 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 362-496 |
| Cow position: | chr14:33791182-33791051 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 362-521 |
| Cow position: | chr14:11643258-11643416 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 60 |
| Conread position: | 362-531 |
| Cow position: | chr14:36559235-36559408 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 517-734 |
| Cow position: | chr14:8027531-8027738 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 518-720 |
| Cow position: | chr14:10078296-10078097 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 523-740 |
| Cow position: | chr14:33758392-33758169 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 524-716 |
| Cow position: | chr14:20071092-20070909 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 524-723 |
| Cow position: | chr14:22941707-22941900 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 524-769 |
| Cow position: | chr14:34199822-34200070 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 205, 12 |
| Conread position: | 525-756 |
| Cow position: | chr14:41132635-41132862 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 527-639 |
| Cow position: | chr14:28707066-28706954 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 527-712 |
| Cow position: | chr14:45577073-45577265 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 527-713 |
| Cow position: | chr14:26433223-26433399 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 527-719 |
| Cow position: | chr14:16457538-16457349 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 527-724 |
| Cow position: | chr14:18301980-18301795 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 87 |
| Conread position: | 527-724 |
| Cow position: | chr14:18306223-18306031 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 527-726 |
| Cow position: | chr14:41486243-41486432 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 527-732 |
| Cow position: | chr14:12033222-12033414 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 527-733 |
| Cow position: | chr14:34096548-34096754 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 527-734 |
| Cow position: | chr14:15469963-15470156 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 528-734 |
| Cow position: | chr14:9029629-9029841 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 529-725 |
| Cow position: | chr14:47200106-47200296 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 530-740 |
| Cow position: | chr14:20640613-20640806 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 535-727 |
| Cow position: | chr14:24981470-24981280 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 535-728 |
| Cow position: | chr14:32784104-32784283 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 535-728 |
| Cow position: | chr14:34983881-34983683 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 133 |
| Conread position: | 535-732 |
| Cow position: | chr14:29239165-29238960 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 535-734 |
| Cow position: | chr14:34331315-34331518 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 536-740 |
| Cow position: | chr14:11831778-11831977 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 5, 81 |
| Conread position: | 537-745 |
| Cow position: | chr14:47224356-47224554 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 540-721 |
| Cow position: | chr14:33326605-33326790 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 544-723 |
| Cow position: | chr14:26442338-26442506 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 547-723 |
| Cow position: | chr14:24746465-24746296 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 548-724 |
| Cow position: | chr14:48762387-48762207 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 553-734 |
| Cow position: | chr14:5639384-5639575 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 588-740 |
| Cow position: | chr14:15258941-15258788 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 88 |
| Conread position: | 616-734 |
| Cow position: | chr14:2853094-2852979 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.