Cow genome map
Conread name: | Ss1.1-Pig4-TMW8032P24.3 |
Conread position: | 325-497 |
Cow position: | chr21:47383466-47383300 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 129 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 38, 6 |
Conread position: | 359-494 |
Cow position: | chr21:641699-641830 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 359-497 |
Cow position: | chr21:7460719-7460854 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 359-497 |
Cow position: | chr21:16120049-16119913 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 359-497 |
Cow position: | chr21:17252867-17252728 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 103 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 359-502 |
Cow position: | chr21:8351181-8351040 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 359-509 |
Cow position: | chr21:16498628-16498777 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 140, 63 |
Conread position: | 359-515 |
Cow position: | chr21:40930363-40930209 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 359-521 |
Cow position: | chr21:71699-71861 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 142, 29 |
Conread position: | 359-522 |
Cow position: | chr21:34654185-34654346 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 142, 63 |
Conread position: | 359-522 |
Cow position: | chr21:41590453-41590287 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 140, 52 |
Conread position: | 359-524 |
Cow position: | chr21:18056017-18055852 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 142, 63 |
Conread position: | 359-525 |
Cow position: | chr21:24875465-24875630 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 71, 63 |
Conread position: | 359-527 |
Cow position: | chr21:742389-742555 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 123 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 142, 63 |
Conread position: | 359-528 |
Cow position: | chr21:27810499-27810672 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 124 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 359-530 |
Cow position: | chr21:24858427-24858596 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 120 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 359-530 |
Cow position: | chr21:38918310-38918483 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 51, 29 |
Conread position: | 360-494 |
Cow position: | chr21:8506433-8506301 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 360-494 |
Cow position: | chr21:8509321-8509189 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 360-497 |
Cow position: | chr21:44732931-44732794 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 443-712 |
Cow position: | chr21:37495939-37495689 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 194 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 28, 70 |
Conread position: | 514-734 |
Cow position: | chr21:652501-652278 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 160 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 10, 30 |
Conread position: | 522-726 |
Cow position: | chr21:47451250-47451453 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 144 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 12, 29 |
Conread position: | 524-731 |
Cow position: | chr21:42841512-42841312 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 147 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 524-734 |
Cow position: | chr21:21479216-21479016 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 124, 12 |
Conread position: | 524-740 |
Cow position: | chr21:13584976-13584771 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 524-752 |
Cow position: | chr21:25159256-25159491 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 168 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 95, 12 |
Conread position: | 527-649 |
Cow position: | chr21:5342007-5341888 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 527-716 |
Cow position: | chr21:35569277-35569080 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 147 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 527-720 |
Cow position: | chr21:9418068-9417881 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 136 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 138, 16 |
Conread position: | 527-723 |
Cow position: | chr21:30980490-30980293 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 92, 18 |
Conread position: | 527-723 |
Cow position: | chr21:32297432-32297242 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 527-723 |
Cow position: | chr21:46264257-46264457 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 145 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 527-727 |
Cow position: | chr21:41450469-41450666 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 143 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 56 |
Conread position: | 527-728 |
Cow position: | chr21:20260232-20260026 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 79, 71 |
Conread position: | 527-731 |
Cow position: | chr21:7394199-7393997 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 147 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 105, 16 |
Conread position: | 527-731 |
Cow position: | chr21:27810477-27810666 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 147 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 527-731 |
Cow position: | chr21:46132661-46132868 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 139 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 527-732 |
Cow position: | chr21:36682412-36682601 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 527-734 |
Cow position: | chr21:48334705-48334508 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 527-742 |
Cow position: | chr21:5486427-5486211 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 30, 62 |
Conread position: | 527-747 |
Cow position: | chr21:41957124-41956912 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 527-753 |
Cow position: | chr21:44825802-44825578 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 23, 91 |
Conread position: | 527-754 |
Cow position: | chr21:29002066-29001845 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 186, 58 |
Conread position: | 530-712 |
Cow position: | chr21:29014469-29014282 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 130 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 531-728 |
Cow position: | chr21:42958657-42958458 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 144 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 532-723 |
Cow position: | chr21:27569081-27568893 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 146 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 535-716 |
Cow position: | chr21:36795698-36795883 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 87, 138 |
Conread position: | 535-721 |
Cow position: | chr21:36910026-36910215 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 61, 56 |
Conread position: | 535-728 |
Cow position: | chr21:13365437-13365636 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 535-731 |
Cow position: | chr21:868829-868644 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 141 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 182, 80 |
Conread position: | 535-740 |
Cow position: | chr21:41974283-41974084 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 141 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 537-733 |
Cow position: | chr21:39845690-39845878 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 40, 79 |
Conread position: | 544-724 |
Cow position: | chr21:32272024-32272197 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 544-725 |
Cow position: | chr21:42562731-42562917 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 132 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 89, 69 |
Conread position: | 549-733 |
Cow position: | chr21:3359293-3359107 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 130 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 555-724 |
Cow position: | chr21:30256159-30255990 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 121 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 584-735 |
Cow position: | chr21:23149801-23149654 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 140, 30 |
Show alignments to all cow chromosomes.