Cow genome map

Conread name: Ss1.1-Pig4-TMW8032P24.3

Conread position: 325-497
Cow position: chr21:47383466-47383300 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 6

Conread position: 359-494
Cow position: chr21:641699-641830 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 359-497
Cow position: chr21:7460719-7460854 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 359-497
Cow position: chr21:16120049-16119913 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 359-497
Cow position: chr21:17252867-17252728 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 359-502
Cow position: chr21:8351181-8351040 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 359-509
Cow position: chr21:16498628-16498777 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 140, 63

Conread position: 359-515
Cow position: chr21:40930363-40930209 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 359-521
Cow position: chr21:71699-71861 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 142, 29

Conread position: 359-522
Cow position: chr21:34654185-34654346 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 142, 63

Conread position: 359-522
Cow position: chr21:41590453-41590287 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 140, 52

Conread position: 359-524
Cow position: chr21:18056017-18055852 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 63

Conread position: 359-525
Cow position: chr21:24875465-24875630 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 71, 63

Conread position: 359-527
Cow position: chr21:742389-742555 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 142, 63

Conread position: 359-528
Cow position: chr21:27810499-27810672 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 359-530
Cow position: chr21:24858427-24858596 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 359-530
Cow position: chr21:38918310-38918483 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 29

Conread position: 360-494
Cow position: chr21:8506433-8506301 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 360-494
Cow position: chr21:8509321-8509189 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 360-497
Cow position: chr21:44732931-44732794 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 443-712
Cow position: chr21:37495939-37495689 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 70

Conread position: 514-734
Cow position: chr21:652501-652278 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 30

Conread position: 522-726
Cow position: chr21:47451250-47451453 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 29

Conread position: 524-731
Cow position: chr21:42841512-42841312 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 524-734
Cow position: chr21:21479216-21479016 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 12

Conread position: 524-740
Cow position: chr21:13584976-13584771 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 524-752
Cow position: chr21:25159256-25159491 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 12

Conread position: 527-649
Cow position: chr21:5342007-5341888 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 527-716
Cow position: chr21:35569277-35569080 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 527-720
Cow position: chr21:9418068-9417881 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 138, 16

Conread position: 527-723
Cow position: chr21:30980490-30980293 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 92, 18

Conread position: 527-723
Cow position: chr21:32297432-32297242 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 527-723
Cow position: chr21:46264257-46264457 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 527-727
Cow position: chr21:41450469-41450666 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 56

Conread position: 527-728
Cow position: chr21:20260232-20260026 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 71

Conread position: 527-731
Cow position: chr21:7394199-7393997 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 16

Conread position: 527-731
Cow position: chr21:27810477-27810666 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 527-731
Cow position: chr21:46132661-46132868 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 527-732
Cow position: chr21:36682412-36682601 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 527-734
Cow position: chr21:48334705-48334508 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 527-742
Cow position: chr21:5486427-5486211 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 30, 62

Conread position: 527-747
Cow position: chr21:41957124-41956912 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 527-753
Cow position: chr21:44825802-44825578 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 91

Conread position: 527-754
Cow position: chr21:29002066-29001845 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 186, 58

Conread position: 530-712
Cow position: chr21:29014469-29014282 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 531-728
Cow position: chr21:42958657-42958458 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 532-723
Cow position: chr21:27569081-27568893 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 535-716
Cow position: chr21:36795698-36795883 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 138

Conread position: 535-721
Cow position: chr21:36910026-36910215 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 56

Conread position: 535-728
Cow position: chr21:13365437-13365636 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 535-731
Cow position: chr21:868829-868644 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 182, 80

Conread position: 535-740
Cow position: chr21:41974283-41974084 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 537-733
Cow position: chr21:39845690-39845878 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 79

Conread position: 544-724
Cow position: chr21:32272024-32272197 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 544-725
Cow position: chr21:42562731-42562917 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 69

Conread position: 549-733
Cow position: chr21:3359293-3359107 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 555-724
Cow position: chr21:30256159-30255990 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 584-735
Cow position: chr21:23149801-23149654 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 140, 30

Show alignments to all cow chromosomes.