Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032P24.3 |
| Conread position: | 306-495 |
| Cow position: | chr22:11613415-11613605 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 326-495 |
| Cow position: | chr22:44741087-44741250 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 326-519 |
| Cow position: | chr22:12892355-12892158 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 180 |
| Conread position: | 328-530 |
| Cow position: | chr22:10594620-10594829 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 359-497 |
| Cow position: | chr22:4060902-4060766 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-497 |
| Cow position: | chr22:12902810-12902674 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 359-497 |
| Cow position: | chr22:18145581-18145717 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 359-497 |
| Cow position: | chr22:44717766-44717902 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-505 |
| Cow position: | chr22:33566049-33565905 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-509 |
| Cow position: | chr22:13957599-13957450 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 141, 59 |
| Conread position: | 359-509 |
| Cow position: | chr22:24890266-24890415 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 359-509 |
| Cow position: | chr22:41982676-41982524 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 359-511 |
| Cow position: | chr22:28146721-28146878 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 359-518 |
| Cow position: | chr22:9735314-9735473 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 61 |
| Conread position: | 359-521 |
| Cow position: | chr22:30818258-30818415 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 359-528 |
| Cow position: | chr22:17852591-17852423 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 46 |
| Conread position: | 359-530 |
| Cow position: | chr22:16533119-16533289 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 359-531 |
| Cow position: | chr22:12207661-12207492 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 359-531 |
| Cow position: | chr22:26188915-26189089 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 359-531 |
| Cow position: | chr22:33030843-33031025 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 172 |
| Conread position: | 359-533 |
| Cow position: | chr22:17652480-17652656 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 61 |
| Conread position: | 360-509 |
| Cow position: | chr22:16094857-16094711 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 141, 29 |
| Conread position: | 360-536 |
| Cow position: | chr22:7518601-7518776 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 141, 62 |
| Conread position: | 360-542 |
| Cow position: | chr22:30684774-30684956 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 60 |
| Conread position: | 360-727 |
| Cow position: | chr22:39472318-39471952 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 183 |
| Conread position: | 362-500 |
| Cow position: | chr22:7584193-7584058 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 362-518 |
| Cow position: | chr22:6721033-6720876 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 139, 60 |
| Conread position: | 363-509 |
| Cow position: | chr22:24134277-24134128 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 371-509 |
| Cow position: | chr22:29546696-29546832 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 43 |
| Conread position: | 512-747 |
| Cow position: | chr22:27643743-27643975 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 513-721 |
| Cow position: | chr22:8480106-8480306 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 513-722 |
| Cow position: | chr22:8504342-8504551 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 515-733 |
| Cow position: | chr22:40048562-40048767 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 516-720 |
| Cow position: | chr22:2623512-2623309 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 520-726 |
| Cow position: | chr22:14690957-14690757 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 524-718 |
| Cow position: | chr22:34726686-34726869 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 524-723 |
| Cow position: | chr22:23440279-23440076 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 524-723 |
| Cow position: | chr22:26339772-26339963 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 524-727 |
| Cow position: | chr22:10285986-10286192 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 524-727 |
| Cow position: | chr22:16044400-16044196 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 524-732 |
| Cow position: | chr22:27431686-27431476 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 143, 77 |
| Conread position: | 524-764 |
| Cow position: | chr22:27274682-27274448 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 223, 12 |
| Conread position: | 525-721 |
| Cow position: | chr22:36569307-36569112 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 527-715 |
| Cow position: | chr22:14245421-14245247 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 527-716 |
| Cow position: | chr22:31510360-31510171 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 527-722 |
| Cow position: | chr22:23036184-23036385 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 166 |
| Conread position: | 527-723 |
| Cow position: | chr22:6494181-6494374 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 86 |
| Conread position: | 527-728 |
| Cow position: | chr22:8138245-8138051 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 527-732 |
| Cow position: | chr22:31308904-31309124 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 527-738 |
| Cow position: | chr22:8570927-8571134 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 171, 96 |
| Conread position: | 527-740 |
| Cow position: | chr22:12195548-12195347 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 527-741 |
| Cow position: | chr22:1871118-1871326 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 527-743 |
| Cow position: | chr22:17152697-17152906 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 527-752 |
| Cow position: | chr22:24063115-24063333 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 527-753 |
| Cow position: | chr22:3250974-3250752 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 158, 78 |
| Conread position: | 527-756 |
| Cow position: | chr22:1659184-1659396 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 528-758 |
| Cow position: | chr22:10315100-10315330 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 529-726 |
| Cow position: | chr22:23120426-23120626 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 529-728 |
| Cow position: | chr22:24336549-24336748 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 93, 102 |
| Conread position: | 529-750 |
| Cow position: | chr22:8324261-8324476 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 197, 61 |
| Conread position: | 530-721 |
| Cow position: | chr22:22266331-22266519 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 530-723 |
| Cow position: | chr22:45684016-45683835 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 530-728 |
| Cow position: | chr22:16797825-16797629 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 530-732 |
| Cow position: | chr22:1928192-1928388 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 532-720 |
| Cow position: | chr22:6709766-6709594 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 534-731 |
| Cow position: | chr22:11468402-11468609 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 535-720 |
| Cow position: | chr22:33030826-33031005 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 535-726 |
| Cow position: | chr22:23077464-23077275 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 45 |
| Conread position: | 535-733 |
| Cow position: | chr22:1983876-1984067 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 189, 80 |
| Conread position: | 535-735 |
| Cow position: | chr22:10339091-10338891 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 190, 111 |
| Conread position: | 535-753 |
| Cow position: | chr22:16823127-16823346 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 536-708 |
| Cow position: | chr22:27066407-27066567 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 536-732 |
| Cow position: | chr22:16621205-16621403 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 114 |
| Conread position: | 539-724 |
| Cow position: | chr22:14647115-14647300 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 539-738 |
| Cow position: | chr22:30253232-30253429 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 180, 82 |
| Conread position: | 543-718 |
| Cow position: | chr22:23695354-23695172 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 544-735 |
| Cow position: | chr22:3486741-3486551 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 178, 61 |
| Conread position: | 552-723 |
| Cow position: | chr22:43942114-43941940 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 554-730 |
| Cow position: | chr22:6960897-6961078 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 558-716 |
| Cow position: | chr22:4977783-4977625 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 598-752 |
| Cow position: | chr22:30689642-30689791 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.